Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AL359715.4-201ENST00000606629 1436 ntBASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AC000367.1-201ENST00000452711 1766 ntBASIC3.02□□□□□ -1.93
HLA-DQB2P05538 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AC010733.2-201ENST00000589496 5702 ntBASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 DCAF13P1-201ENST00000495256 1330 ntBASIC3.02□□□□□ -1.93
HLA-DQB2P05538 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 MIR422A-201ENST00000362286 90 ntBASIC3.02□□□□□ -1.93
HLA-DQB2P05538 RNU6-618P-201ENST00000363518 112 ntBASIC3.02□□□□□ -1.93
HLA-DQB2P05538 CCNB2P1-201ENST00000399411 1150 ntBASIC3.02□□□□□ -1.93
HLA-DQB2P05538 RNA5SP498-201ENST00000411342 120 ntBASIC3.02□□□□□ -1.93
HLA-DQB2P05538 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AL353898.1-201ENST00000444055 238 ntBASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 RPL30P11-201ENST00000495304 339 ntBASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AL035404.1-201ENST00000497982 568 ntBASIC3.02□□□□□ -1.93
HLA-DQB2P05538 OR2A20P-203ENST00000498397 1268 ntBASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 RN7SKP43-201ENST00000516173 320 ntBASIC3.02□□□□□ -1.93
HLA-DQB2P05538 RNA5SP341-201ENST00000516261 117 ntBASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AL121603.1-201ENST00000553815 142 ntBASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AP003117.2-201ENST00000606010 545 ntBASIC3.02□□□□□ -1.93
HLA-DQB2P05538 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DQB2P05538 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 RNU6-670P-201ENST00000364312 104 ntBASIC3.01□□□□□ -1.93
HLA-DQB2P05538 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AC004022.2-201ENST00000413824 193 ntBASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AJ239321.1-201ENST00000424255 564 ntBASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AC006946.1-201ENST00000429106 328 ntBASIC3.01□□□□□ -1.93
HLA-DQB2P05538 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 snoU13.22-201ENST00000459428 104 ntBASIC3.01□□□□□ -1.93
HLA-DQB2P05538 RPL21P41-201ENST00000459863 264 ntBASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AP001992.1-205ENST00000462248 379 ntBASIC3.01□□□□□ -1.93
HLA-DQB2P05538 RPS17P11-201ENST00000474297 293 ntBASIC3.01□□□□□ -1.93
HLA-DQB2P05538 RPS29P2-201ENST00000479278 136 ntBASIC3.01□□□□□ -1.93
HLA-DQB2P05538 MTATP6P22-201ENST00000507369 598 ntBASIC3.01□□□□□ -1.93
HLA-DQB2P05538 MTCO1P30-201ENST00000515244 580 ntBASIC3.01□□□□□ -1.93
HLA-DQB2P05538 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 RNU2-58P-201ENST00000516403 183 ntBASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AC015871.2-201ENST00000603605 948 ntBASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DQB2P05538 AP001148.1-201ENST00000624124 2359 ntBASIC3□□□□□ -1.93
HLA-DQB2P05538 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQB2P05538 RPL31P1-201ENST00000398116 372 ntBASIC3□□□□□ -1.93
HLA-DQB2P05538 U3.42-201ENST00000408746 214 ntBASIC3□□□□□ -1.93
HLA-DQB2P05538 PRELID3BP11-201ENST00000414230 479 ntBASIC3□□□□□ -1.93
HLA-DQB2P05538 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DQB2P05538 AL445528.1-201ENST00000426330 420 ntBASIC3□□□□□ -1.93
HLA-DQB2P05538 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DQB2P05538 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DQB2P05538 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DQB2P05538 CBX1P4-201ENST00000439415 457 ntBASIC3□□□□□ -1.93
HLA-DQB2P05538 HMGB1P5-202ENST00000451497 985 ntBASIC3□□□□□ -1.93
HLA-DQB2P05538 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DQB2P05538 AC104629.2-201ENST00000468627 598 ntBASIC3□□□□□ -1.93
HLA-DQB2P05538 AP002884.2-201ENST00000471647 395 ntBASIC3□□□□□ -1.93
HLA-DQB2P05538 AC017015.1-201ENST00000477387 286 ntBASIC3□□□□□ -1.93
HLA-DQB2P05538 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DQB2P05538 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3□□□□□ -1.93
HLA-DQB2P05538 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
HLA-DQB2P05538 RNA5SP380-201ENST00000517190 98 ntBASIC3□□□□□ -1.93
HLA-DQB2P05538 OR5G4P-201ENST00000525251 760 ntBASIC3□□□□□ -1.93
HLA-DQB2P05538 AC006270.2-201ENST00000578523 652 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms