Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC026402.1-201ENST00000513642 170 ntBASIC3.8□□□□□ -1.8
PRKNO60260 RNU6-488P-201ENST00000515918 99 ntBASIC3.8□□□□□ -1.8
PRKNO60260 RN7SKP96-201ENST00000516948 297 ntBASIC3.8□□□□□ -1.8
PRKNO60260 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.8□□□□□ -1.8
PRKNO60260 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.8□□□□□ -1.8
PRKNO60260 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.8□□□□□ -1.8
PRKNO60260 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.8□□□□□ -1.8
PRKNO60260 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.8□□□□□ -1.8
PRKNO60260 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.8□□□□□ -1.8
PRKNO60260 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.8□□□□□ -1.8
PRKNO60260 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.8□□□□□ -1.8
PRKNO60260 MIR4716-201ENST00000579628 84 ntBASIC3.8□□□□□ -1.8
PRKNO60260 MIR5684-201ENST00000585074 65 ntBASIC3.8□□□□□ -1.8
PRKNO60260 AL590229.1-201ENST00000603497 542 ntBASIC3.8□□□□□ -1.8
PRKNO60260 AC018714.1-201ENST00000605028 208 ntBASIC3.8□□□□□ -1.8
PRKNO60260 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.8□□□□□ -1.8
PRKNO60260 RNU4-89P-201ENST00000607443 133 ntBASIC3.8□□□□□ -1.8
PRKNO60260 AC245297.2-201ENST00000610119 565 ntBASIC3.8□□□□□ -1.8
PRKNO60260 AC123768.4-201ENST00000616244 701 ntBASIC3.8□□□□□ -1.8
PRKNO60260 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.8□□□□□ -1.8
PRKNO60260 AC055839.1-201ENST00000634467 498 ntBASIC3.8□□□□□ -1.8
PRKNO60260 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.8□□□□□ -1.8
PRKNO60260 ERCC6-202ENST00000374127 1782 ntBASIC3.8□□□□□ -1.8
PRKNO60260 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.8□□□□□ -1.8
PRKNO60260 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
PRKNO60260 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PRKNO60260 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
PRKNO60260 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.8□□□□□ -1.8
PRKNO60260 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.8□□□□□ -1.8
PRKNO60260 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PRKNO60260 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.79□□□□□ -1.8
PRKNO60260 AC074029.4-201ENST00000624796 1859 ntBASIC3.79□□□□□ -1.8
PRKNO60260 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRKNO60260 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.79□□□□□ -1.8
PRKNO60260 AC021755.1-201ENST00000559747 1447 ntBASIC3.79□□□□□ -1.8
PRKNO60260 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.79□□□□□ -1.8
PRKNO60260 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRKNO60260 AC007390.2-201ENST00000606229 3803 ntBASIC3.79□□□□□ -1.8
PRKNO60260 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRKNO60260 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PRKNO60260 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
PRKNO60260 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRKNO60260 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.79□□□□□ -1.8
PRKNO60260 RNU6-444P-201ENST00000383988 108 ntBASIC3.79□□□□□ -1.8
PRKNO60260 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.79□□□□□ -1.8
PRKNO60260 ATP5F1P4-201ENST00000397288 746 ntBASIC3.79□□□□□ -1.8
PRKNO60260 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PRKNO60260 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.79□□□□□ -1.8
PRKNO60260 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.79□□□□□ -1.8
PRKNO60260 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.79□□□□□ -1.8
PRKNO60260 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.79□□□□□ -1.8
PRKNO60260 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.79□□□□□ -1.8
PRKNO60260 OR5BE1P-201ENST00000425977 939 ntBASIC3.79□□□□□ -1.8
PRKNO60260 AL031736.2-201ENST00000426573 787 ntBASIC3.79□□□□□ -1.8
PRKNO60260 IFNNP1-201ENST00000429219 553 ntBASIC3.79□□□□□ -1.8
PRKNO60260 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.79□□□□□ -1.8
PRKNO60260 HSFY6P-201ENST00000445573 403 ntBASIC3.79□□□□□ -1.8
PRKNO60260 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.79□□□□□ -1.8
PRKNO60260 AL162151.2-201ENST00000448875 158 ntBASIC3.79□□□□□ -1.8
PRKNO60260 RPL5P32-201ENST00000454085 879 ntBASIC3.79□□□□□ -1.8
PRKNO60260 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.79□□□□□ -1.8
PRKNO60260 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.79□□□□□ -1.8
PRKNO60260 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.79□□□□□ -1.8
PRKNO60260 RPL30P6-201ENST00000475925 342 ntBASIC3.79□□□□□ -1.8
PRKNO60260 AL132838.2-201ENST00000492041 314 ntBASIC3.79□□□□□ -1.8
PRKNO60260 AC104685.1-201ENST00000502445 371 ntBASIC3.79□□□□□ -1.8
PRKNO60260 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.79□□□□□ -1.8
PRKNO60260 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.79□□□□□ -1.8
PRKNO60260 RNU6-678P-201ENST00000516832 109 ntBASIC3.79□□□□□ -1.8
PRKNO60260 SMARCE1P4-201ENST00000523647 241 ntBASIC3.79□□□□□ -1.8
PRKNO60260 OR5AK1P-201ENST00000524837 922 ntBASIC3.79□□□□□ -1.8
PRKNO60260 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.79□□□□□ -1.8
PRKNO60260 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.79□□□□□ -1.8
PRKNO60260 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.79□□□□□ -1.8
PRKNO60260 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PRKNO60260 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.79□□□□□ -1.8
PRKNO60260 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.79□□□□□ -1.8
PRKNO60260 AC124068.1-201ENST00000563131 678 ntBASIC3.79□□□□□ -1.8
PRKNO60260 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.79□□□□□ -1.8
PRKNO60260 EIF5A2P1-201ENST00000564027 460 ntBASIC3.79□□□□□ -1.8
PRKNO60260 AL512347.1-201ENST00000566420 503 ntBASIC3.79□□□□□ -1.8
PRKNO60260 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.79□□□□□ -1.8
PRKNO60260 AP000811.1-201ENST00000603803 651 ntBASIC3.79□□□□□ -1.8
PRKNO60260 AL451044.1-201ENST00000604867 238 ntBASIC3.79□□□□□ -1.8
PRKNO60260 AC112220.3-201ENST00000605502 502 ntBASIC3.79□□□□□ -1.8
PRKNO60260 AL031666.3-201ENST00000609320 1006 ntBASIC3.79□□□□□ -1.8
PRKNO60260 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.79□□□□□ -1.8
PRKNO60260 MIR7154-201ENST00000620673 73 ntBASIC3.79□□□□□ -1.8
PRKNO60260 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.79□□□□□ -1.8
PRKNO60260 AC091965.5-201ENST00000624785 342 ntBASIC3.79□□□□□ -1.8
PRKNO60260 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRKNO60260 AC026634.1-201ENST00000634369 198 ntBASIC3.79□□□□□ -1.8
PRKNO60260 OR5BE1P-202ENST00000641168 1176 ntBASIC3.79□□□□□ -1.8
PRKNO60260 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PRKNO60260 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRKNO60260 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PRKNO60260 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.79□□□□□ -1.8
PRKNO60260 MARK2P15-201ENST00000432204 2186 ntBASIC3.79□□□□□ -1.8
PRKNO60260 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRKNO60260 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms