Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.2□□□□□ -1.74
LDB2O43679 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.2□□□□□ -1.74
LDB2O43679 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LDB2O43679 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.2□□□□□ -1.74
LDB2O43679 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LDB2O43679 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LDB2O43679 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.19□□□□□ -1.74
LDB2O43679 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LDB2O43679 AL133243.3-201ENST00000617415 3004 ntBASIC4.19□□□□□ -1.74
LDB2O43679 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LDB2O43679 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LDB2O43679 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
LDB2O43679 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
LDB2O43679 USP9YP4-201ENST00000424401 1745 ntBASIC4.19□□□□□ -1.74
LDB2O43679 Y_RNA.194-201ENST00000363985 102 ntBASIC4.19□□□□□ -1.74
LDB2O43679 RNA5SP479-201ENST00000364858 117 ntBASIC4.19□□□□□ -1.74
LDB2O43679 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LDB2O43679 RNU6-146P-201ENST00000384602 108 ntBASIC4.19□□□□□ -1.74
LDB2O43679 SNORA26.8-201ENST00000391306 124 ntBASIC4.19□□□□□ -1.74
LDB2O43679 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.19□□□□□ -1.74
LDB2O43679 AL121978.1-201ENST00000402778 359 ntBASIC4.19□□□□□ -1.74
LDB2O43679 MTCO3P31-201ENST00000405526 789 ntBASIC4.19□□□□□ -1.74
LDB2O43679 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.19□□□□□ -1.74
LDB2O43679 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LDB2O43679 Z99497.1-201ENST00000421282 135 ntBASIC4.19□□□□□ -1.74
LDB2O43679 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LDB2O43679 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.19□□□□□ -1.74
LDB2O43679 NPM1P24-201ENST00000428039 894 ntBASIC4.19□□□□□ -1.74
LDB2O43679 BTF3P10-201ENST00000433415 495 ntBASIC4.19□□□□□ -1.74
LDB2O43679 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.19□□□□□ -1.74
LDB2O43679 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LDB2O43679 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.19□□□□□ -1.74
LDB2O43679 RAD23BP3-201ENST00000454157 1152 ntBASIC4.19□□□□□ -1.74
LDB2O43679 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.19□□□□□ -1.74
LDB2O43679 RN7SL585P-201ENST00000470538 280 ntBASIC4.19□□□□□ -1.74
LDB2O43679 AC072039.1-201ENST00000477611 581 ntBASIC4.19□□□□□ -1.74
LDB2O43679 AC006517.1-201ENST00000480485 328 ntBASIC4.19□□□□□ -1.74
LDB2O43679 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.19□□□□□ -1.74
LDB2O43679 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.19□□□□□ -1.74
LDB2O43679 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.19□□□□□ -1.74
LDB2O43679 MTND4P2-201ENST00000507767 1203 ntBASIC4.19□□□□□ -1.74
LDB2O43679 LTV1P1-201ENST00000510683 1237 ntBASIC4.19□□□□□ -1.74
LDB2O43679 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.19□□□□□ -1.74
LDB2O43679 RPL7L1P13-201ENST00000511702 739 ntBASIC4.19□□□□□ -1.74
LDB2O43679 MTND3P5-201ENST00000512798 333 ntBASIC4.19□□□□□ -1.74
LDB2O43679 AC099522.1-202ENST00000514718 367 ntBASIC4.19□□□□□ -1.74
LDB2O43679 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.19□□□□□ -1.74
LDB2O43679 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.19□□□□□ -1.74
LDB2O43679 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.19□□□□□ -1.74
LDB2O43679 HIGD1AP10-201ENST00000527837 282 ntBASIC4.19□□□□□ -1.74
LDB2O43679 AC105233.3-201ENST00000531125 744 ntBASIC4.19□□□□□ -1.74
LDB2O43679 SLC2A13P1-201ENST00000531560 322 ntBASIC4.19□□□□□ -1.74
LDB2O43679 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.19□□□□□ -1.74
LDB2O43679 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.19□□□□□ -1.74
LDB2O43679 OR7K1P-201ENST00000546439 926 ntBASIC4.19□□□□□ -1.74
LDB2O43679 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.19□□□□□ -1.74
LDB2O43679 AC069240.1-201ENST00000548774 375 ntBASIC4.19□□□□□ -1.74
LDB2O43679 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.19□□□□□ -1.74
LDB2O43679 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.19□□□□□ -1.74
LDB2O43679 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.19□□□□□ -1.74
LDB2O43679 SERPINE4P-201ENST00000554978 281 ntBASIC4.19□□□□□ -1.74
LDB2O43679 AC068446.3-201ENST00000555285 382 ntBASIC4.19□□□□□ -1.74
LDB2O43679 TVP23BP1-201ENST00000557500 617 ntBASIC4.19□□□□□ -1.74
LDB2O43679 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.19□□□□□ -1.74
LDB2O43679 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.19□□□□□ -1.74
LDB2O43679 AL512347.1-201ENST00000566420 503 ntBASIC4.19□□□□□ -1.74
LDB2O43679 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.19□□□□□ -1.74
LDB2O43679 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.19□□□□□ -1.74
LDB2O43679 AC008687.2-201ENST00000597865 520 ntBASIC4.19□□□□□ -1.74
LDB2O43679 RN7SKP299-201ENST00000606679 301 ntBASIC4.19□□□□□ -1.74
LDB2O43679 AC092650.2-201ENST00000619984 902 ntBASIC4.19□□□□□ -1.74
LDB2O43679 AC068724.3-201ENST00000625906 87 ntBASIC4.19□□□□□ -1.74
LDB2O43679 BMS1P21-201ENST00000634565 365 ntBASIC4.19□□□□□ -1.74
LDB2O43679 AC099063.3-201ENST00000642066 185 ntBASIC4.19□□□□□ -1.74
LDB2O43679 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LDB2O43679 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
LDB2O43679 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.19□□□□□ -1.74
LDB2O43679 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.19□□□□□ -1.74
LDB2O43679 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.19□□□□□ -1.74
LDB2O43679 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
LDB2O43679 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
LDB2O43679 AC011266.1-201ENST00000624119 3569 ntBASIC4.18□□□□□ -1.74
LDB2O43679 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LDB2O43679 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LDB2O43679 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LDB2O43679 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
LDB2O43679 DDX43P2-201ENST00000604753 1354 ntBASIC4.18□□□□□ -1.74
LDB2O43679 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LDB2O43679 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
LDB2O43679 AL672167.1-206ENST00000356293 943 ntBASIC4.18□□□□□ -1.74
LDB2O43679 RNA5SP388-201ENST00000362584 119 ntBASIC4.18□□□□□ -1.74
LDB2O43679 SNORA37-201ENST00000384504 129 ntBASIC4.18□□□□□ -1.74
LDB2O43679 RPS24P12-201ENST00000402084 394 ntBASIC4.18□□□□□ -1.74
LDB2O43679 CYCSP45-201ENST00000402289 315 ntBASIC4.18□□□□□ -1.74
LDB2O43679 RPL23AP26-201ENST00000412728 464 ntBASIC4.18□□□□□ -1.74
LDB2O43679 RPL23AP39-201ENST00000415533 405 ntBASIC4.18□□□□□ -1.74
LDB2O43679 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.18□□□□□ -1.74
LDB2O43679 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.18□□□□□ -1.74
LDB2O43679 RPL17P36-201ENST00000420302 549 ntBASIC4.18□□□□□ -1.74
LDB2O43679 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms