Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.03□□□□□ -1.92
SGCEO43556 RPL23AP22-201ENST00000437556 453 ntBASIC3.03□□□□□ -1.92
SGCEO43556 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.03□□□□□ -1.92
SGCEO43556 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.03□□□□□ -1.92
SGCEO43556 ARPC3P2-201ENST00000457786 533 ntBASIC3.03□□□□□ -1.92
SGCEO43556 RN7SL542P-201ENST00000467147 294 ntBASIC3.03□□□□□ -1.92
SGCEO43556 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.03□□□□□ -1.92
SGCEO43556 AC006483.1-201ENST00000487308 313 ntBASIC3.03□□□□□ -1.92
SGCEO43556 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.03□□□□□ -1.92
SGCEO43556 AP004371.1-201ENST00000525240 214 ntBASIC3.03□□□□□ -1.92
SGCEO43556 C1DP5-201ENST00000525775 383 ntBASIC3.03□□□□□ -1.92
SGCEO43556 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SGCEO43556 AC139103.1-201ENST00000534696 1030 ntBASIC3.03□□□□□ -1.92
SGCEO43556 AP000619.3-201ENST00000535634 1127 ntBASIC3.03□□□□□ -1.92
SGCEO43556 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.03□□□□□ -1.92
SGCEO43556 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.03□□□□□ -1.92
SGCEO43556 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.03□□□□□ -1.92
SGCEO43556 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.03□□□□□ -1.92
SGCEO43556 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.03□□□□□ -1.92
SGCEO43556 AC006130.2-201ENST00000586202 326 ntBASIC3.03□□□□□ -1.92
SGCEO43556 AC008507.1-201ENST00000587506 734 ntBASIC3.03□□□□□ -1.92
SGCEO43556 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.03□□□□□ -1.92
SGCEO43556 AC006557.5-201ENST00000603126 811 ntBASIC3.03□□□□□ -1.92
SGCEO43556 AL590282.1-201ENST00000610379 1136 ntBASIC3.03□□□□□ -1.92
SGCEO43556 AC110801.1-201ENST00000623590 212 ntBASIC3.03□□□□□ -1.92
SGCEO43556 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.03□□□□□ -1.92
SGCEO43556 AL034408.1-202ENST00000636088 415 ntBASIC3.03□□□□□ -1.92
SGCEO43556 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.03□□□□□ -1.92
SGCEO43556 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.03□□□□□ -1.92
SGCEO43556 AC009093.8-201ENST00000641769 292 ntBASIC3.03□□□□□ -1.92
SGCEO43556 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.03□□□□□ -1.92
SGCEO43556 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.03□□□□□ -1.92
SGCEO43556 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SGCEO43556 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SGCEO43556 AC032011.1-201ENST00000611703 1549 ntBASIC3.03□□□□□ -1.92
SGCEO43556 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
SGCEO43556 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SGCEO43556 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SGCEO43556 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SGCEO43556 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.02□□□□□ -1.93
SGCEO43556 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SGCEO43556 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SGCEO43556 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SGCEO43556 MIR148B-201ENST00000362252 99 ntBASIC3.02□□□□□ -1.93
SGCEO43556 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SGCEO43556 FABP12P1-201ENST00000401911 322 ntBASIC3.02□□□□□ -1.93
SGCEO43556 AL583834.1-201ENST00000406943 343 ntBASIC3.02□□□□□ -1.93
SGCEO43556 RNA5SP129-201ENST00000410276 118 ntBASIC3.02□□□□□ -1.93
SGCEO43556 RNA5SP107-201ENST00000411358 122 ntBASIC3.02□□□□□ -1.93
SGCEO43556 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.02□□□□□ -1.93
SGCEO43556 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.02□□□□□ -1.93
SGCEO43556 RPL7P46-201ENST00000425129 740 ntBASIC3.02□□□□□ -1.93
SGCEO43556 AP000907.1-201ENST00000428428 510 ntBASIC3.02□□□□□ -1.93
SGCEO43556 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.02□□□□□ -1.93
SGCEO43556 AL513175.1-201ENST00000431492 780 ntBASIC3.02□□□□□ -1.93
SGCEO43556 AC073063.1-201ENST00000434352 607 ntBASIC3.02□□□□□ -1.93
SGCEO43556 HSPD1P21-201ENST00000436541 245 ntBASIC3.02□□□□□ -1.93
SGCEO43556 RPL21P133-201ENST00000443666 476 ntBASIC3.02□□□□□ -1.93
SGCEO43556 RPL7P59-201ENST00000447700 943 ntBASIC3.02□□□□□ -1.93
SGCEO43556 SSXP4-201ENST00000451349 245 ntBASIC3.02□□□□□ -1.93
SGCEO43556 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.02□□□□□ -1.93
SGCEO43556 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.02□□□□□ -1.93
SGCEO43556 AC106707.2-201ENST00000484182 374 ntBASIC3.02□□□□□ -1.93
SGCEO43556 AL024509.2-201ENST00000493462 493 ntBASIC3.02□□□□□ -1.93
SGCEO43556 AC020893.1-201ENST00000502452 580 ntBASIC3.02□□□□□ -1.93
SGCEO43556 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.02□□□□□ -1.93
SGCEO43556 MTCO1P31-201ENST00000506355 492 ntBASIC3.02□□□□□ -1.93
SGCEO43556 RN7SKP13-201ENST00000515933 244 ntBASIC3.02□□□□□ -1.93
SGCEO43556 AC107934.2-201ENST00000518653 310 ntBASIC3.02□□□□□ -1.93
SGCEO43556 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.02□□□□□ -1.93
SGCEO43556 MTCYBP28-201ENST00000566728 1132 ntBASIC3.02□□□□□ -1.93
SGCEO43556 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.02□□□□□ -1.93
SGCEO43556 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
SGCEO43556 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.02□□□□□ -1.93
SGCEO43556 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.02□□□□□ -1.93
SGCEO43556 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.02□□□□□ -1.93
SGCEO43556 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.02□□□□□ -1.93
SGCEO43556 U6.107-201ENST00000637108 79 ntBASIC3.02□□□□□ -1.93
SGCEO43556 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.02□□□□□ -1.93
SGCEO43556 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SGCEO43556 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SGCEO43556 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.02□□□□□ -1.93
SGCEO43556 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
SGCEO43556 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
SGCEO43556 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.02□□□□□ -1.93
SGCEO43556 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SGCEO43556 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SGCEO43556 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SGCEO43556 AF117829.1-206ENST00000621883 3802 ntBASIC3.01□□□□□ -1.93
SGCEO43556 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
SGCEO43556 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SGCEO43556 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SGCEO43556 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SGCEO43556 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SGCEO43556 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SGCEO43556 RSL24D1P1-201ENST00000404972 493 ntBASIC3.01□□□□□ -1.93
SGCEO43556 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.01□□□□□ -1.93
SGCEO43556 SYF2P2-201ENST00000417620 583 ntBASIC3.01□□□□□ -1.93
SGCEO43556 TOMM22P1-201ENST00000418578 312 ntBASIC3.01□□□□□ -1.93
SGCEO43556 AC245291.1-201ENST00000419501 328 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms