Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CLDN3O15551 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.82□□□□□ -1.8
CLDN3O15551 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN3O15551 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN3O15551 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN3O15551 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN3O15551 RNA5SP50-201ENST00000363731 107 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 RNA5SP189-201ENST00000364920 115 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 RNA5SP235-201ENST00000365411 114 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 AC234772.1-201ENST00000377927 937 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 RNU6-444P-201ENST00000383988 108 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.81□□□□□ -1.8
CLDN3O15551 EIF5P1-201ENST00000400019 1231 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 PTGES3P2-201ENST00000407942 482 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 AC008280.1-201ENST00000418851 412 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 MTCYBP24-201ENST00000420387 1106 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 AC246680.2-201ENST00000422106 389 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 HSFY3P-201ENST00000444242 1191 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 CYCSP35-201ENST00000451978 304 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN3O15551 AC078857.1-201ENST00000469870 667 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.81□□□□□ -1.8
CLDN3O15551 SETP6-201ENST00000479329 568 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 AC025518.1-201ENST00000479856 347 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN3O15551 RPL7P47-201ENST00000497299 556 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 SETP14-201ENST00000497538 873 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.81□□□□□ -1.8
CLDN3O15551 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN3O15551 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN3O15551 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN3O15551 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.81□□□□□ -1.8
CLDN3O15551 AC004217.3-201ENST00000551552 878 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 DUXAP6-201ENST00000553858 601 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN3O15551 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.81□□□□□ -1.8
CLDN3O15551 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.81□□□□□ -1.8
CLDN3O15551 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.81□□□□□ -1.8
CLDN3O15551 AC090616.5-202ENST00000582111 297 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN3O15551 AC026741.1-201ENST00000605892 482 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 AC015967.1-201ENST00000619893 476 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CLDN3O15551 AC068647.1-201ENST00000489539 2265 ntBASIC3.81□□□□□ -1.8
CLDN3O15551 MTCO1P12-201ENST00000414273 1543 ntBASIC3.8□□□□□ -1.8
CLDN3O15551 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN3O15551 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN3O15551 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CLDN3O15551 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN3O15551 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
CLDN3O15551 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN3O15551 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN3O15551 AP002784.2-201ENST00000397300 549 ntBASIC3.8□□□□□ -1.8
CLDN3O15551 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN3O15551 SSXP10-201ENST00000402595 565 ntBASIC3.8□□□□□ -1.8
CLDN3O15551 AL138878.1-201ENST00000405131 347 ntBASIC3.8□□□□□ -1.8
CLDN3O15551 Z98941.1-201ENST00000407764 100 ntBASIC3.8□□□□□ -1.8
CLDN3O15551 UBE2V1P9-201ENST00000414760 368 ntBASIC3.8□□□□□ -1.8
CLDN3O15551 AC093578.1-201ENST00000415219 368 ntBASIC3.8□□□□□ -1.8
CLDN3O15551 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN3O15551 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN3O15551 AC006994.1-201ENST00000438212 839 ntBASIC3.8□□□□□ -1.8
CLDN3O15551 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.8□□□□□ -1.8
CLDN3O15551 RNF138P1-201ENST00000502765 546 ntBASIC3.8□□□□□ -1.8
CLDN3O15551 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN3O15551 AC027338.1-201ENST00000514840 825 ntBASIC3.8□□□□□ -1.8
CLDN3O15551 AC124293.1-201ENST00000530034 493 ntBASIC3.8□□□□□ -1.8
CLDN3O15551 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN3O15551 OR5D17P-201ENST00000531492 978 ntBASIC3.8□□□□□ -1.8
CLDN3O15551 AC026333.2-201ENST00000542164 106 ntBASIC3.8□□□□□ -1.8
CLDN3O15551 AC022069.1-201ENST00000582910 658 ntBASIC3.8□□□□□ -1.8
CLDN3O15551 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN3O15551 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN3O15551 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CLDN3O15551 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN3O15551 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN3O15551 AC024341.1-201ENST00000526444 1552 ntBASIC3.8□□□□□ -1.8
CLDN3O15551 MFSD8-233ENST00000641482 4860 ntBASIC3.79□□□□□ -1.8
CLDN3O15551 AL133383.2-201ENST00000622958 2336 ntBASIC3.79□□□□□ -1.8
CLDN3O15551 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN3O15551 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN3O15551 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN3O15551 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN3O15551 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN3O15551 MTND4P10-201ENST00000446199 1363 ntBASIC3.79□□□□□ -1.8
CLDN3O15551 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN3O15551 RNU4-35P-201ENST00000362588 141 ntBASIC3.79□□□□□ -1.8
CLDN3O15551 RNU6-374P-201ENST00000364146 108 ntBASIC3.79□□□□□ -1.8
CLDN3O15551 MIR183-201ENST00000384958 110 ntBASIC3.79□□□□□ -1.8
CLDN3O15551 SNORD17-201ENST00000390930 237 ntBASIC3.79□□□□□ -1.8
CLDN3O15551 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CLDN3O15551 RPS3AP25-201ENST00000411660 793 ntBASIC3.79□□□□□ -1.8
CLDN3O15551 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN3O15551 RPS7P15-201ENST00000415804 584 ntBASIC3.79□□□□□ -1.8
CLDN3O15551 AC017079.2-201ENST00000416102 485 ntBASIC3.79□□□□□ -1.8
CLDN3O15551 AC127526.1-201ENST00000417526 366 ntBASIC3.79□□□□□ -1.8
CLDN3O15551 AC068533.1-201ENST00000418542 415 ntBASIC3.79□□□□□ -1.8
CLDN3O15551 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms