Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.91□□□□□ -1.78
TO15178 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.91□□□□□ -1.78
TO15178 PARP4P3-201ENST00000510265 317 ntBASIC3.91□□□□□ -1.78
TO15178 MTCYBP37-201ENST00000510642 1133 ntBASIC3.91□□□□□ -1.78
TO15178 AC099522.1-202ENST00000514718 367 ntBASIC3.91□□□□□ -1.78
TO15178 MTCO1P24-201ENST00000515438 1558 ntBASIC3.91□□□□□ -1.78
TO15178 UBTFL10-201ENST00000528532 562 ntBASIC3.91□□□□□ -1.78
TO15178 AP003461.1-201ENST00000528866 78 ntBASIC3.91□□□□□ -1.78
TO15178 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.91□□□□□ -1.78
TO15178 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TO15178 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.91□□□□□ -1.78
TO15178 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.91□□□□□ -1.78
TO15178 AC092470.1-201ENST00000546187 132 ntBASIC3.91□□□□□ -1.78
TO15178 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.91□□□□□ -1.78
TO15178 AC009094.1-201ENST00000564443 426 ntBASIC3.91□□□□□ -1.78
TO15178 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.91□□□□□ -1.78
TO15178 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.91□□□□□ -1.78
TO15178 YWHAQP7-201ENST00000603536 658 ntBASIC3.91□□□□□ -1.78
TO15178 AL592221.1-201ENST00000605266 382 ntBASIC3.91□□□□□ -1.78
TO15178 AC110741.2-201ENST00000605278 268 ntBASIC3.91□□□□□ -1.78
TO15178 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.91□□□□□ -1.78
TO15178 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.91□□□□□ -1.78
TO15178 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.91□□□□□ -1.78
TO15178 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
TO15178 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TO15178 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
TO15178 AL390862.1-201ENST00000635467 1469 ntBASIC3.91□□□□□ -1.78
TO15178 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TO15178 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TO15178 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
TO15178 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
TO15178 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
TO15178 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TO15178 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
TO15178 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TO15178 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TO15178 MIR513A2-201ENST00000385249 127 ntBASIC3.9□□□□□ -1.79
TO15178 EIF5P1-201ENST00000400019 1231 ntBASIC3.9□□□□□ -1.79
TO15178 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.9□□□□□ -1.79
TO15178 RNU6-757P-201ENST00000410334 100 ntBASIC3.9□□□□□ -1.79
TO15178 RNU2-37P-201ENST00000410695 177 ntBASIC3.9□□□□□ -1.79
TO15178 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.9□□□□□ -1.79
TO15178 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.9□□□□□ -1.79
TO15178 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.9□□□□□ -1.79
TO15178 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.9□□□□□ -1.79
TO15178 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.9□□□□□ -1.79
TO15178 SLC31A1P1-201ENST00000451221 567 ntBASIC3.9□□□□□ -1.79
TO15178 RNA5SP246-201ENST00000458909 119 ntBASIC3.9□□□□□ -1.79
TO15178 AC092757.1-201ENST00000467293 467 ntBASIC3.9□□□□□ -1.79
TO15178 NCOR1P1-202ENST00000486162 291 ntBASIC3.9□□□□□ -1.79
TO15178 RPL7P38-201ENST00000488396 739 ntBASIC3.9□□□□□ -1.79
TO15178 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TO15178 NDUFB4P9-201ENST00000511646 388 ntBASIC3.9□□□□□ -1.79
TO15178 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.9□□□□□ -1.79
TO15178 AP003730.1-201ENST00000524605 285 ntBASIC3.9□□□□□ -1.79
TO15178 OR4R3P-201ENST00000525084 838 ntBASIC3.9□□□□□ -1.79
TO15178 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.9□□□□□ -1.79
TO15178 AC008127.2-201ENST00000549925 1075 ntBASIC3.9□□□□□ -1.79
TO15178 ZNF321P-202ENST00000550843 495 ntBASIC3.9□□□□□ -1.79
TO15178 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.9□□□□□ -1.79
TO15178 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TO15178 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.9□□□□□ -1.79
TO15178 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.9□□□□□ -1.79
TO15178 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.9□□□□□ -1.79
TO15178 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.9□□□□□ -1.79
TO15178 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.9□□□□□ -1.79
TO15178 IPO5P1-202ENST00000600039 287 ntBASIC3.9□□□□□ -1.79
TO15178 AC004987.4-201ENST00000603383 338 ntBASIC3.9□□□□□ -1.79
TO15178 AL009028.1-201ENST00000604895 802 ntBASIC3.9□□□□□ -1.79
TO15178 AC069304.2-201ENST00000605154 435 ntBASIC3.9□□□□□ -1.79
TO15178 AL445567.2-201ENST00000618935 498 ntBASIC3.9□□□□□ -1.79
TO15178 AL359715.5-201ENST00000623431 443 ntBASIC3.9□□□□□ -1.79
TO15178 AC079416.3-201ENST00000624479 549 ntBASIC3.9□□□□□ -1.79
TO15178 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.9□□□□□ -1.79
TO15178 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
TO15178 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TO15178 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.9□□□□□ -1.79
TO15178 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.9□□□□□ -1.79
TO15178 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TO15178 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TO15178 AC066616.2-201ENST00000559334 1481 ntBASIC3.9□□□□□ -1.79
TO15178 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
TO15178 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TO15178 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.9□□□□□ -1.79
TO15178 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
TO15178 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TO15178 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TO15178 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TO15178 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TO15178 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.89□□□□□ -1.79
TO15178 AC130650.2-201ENST00000618736 2403 ntBASIC3.89□□□□□ -1.79
TO15178 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
TO15178 MIR383-201ENST00000362257 73 ntBASIC3.89□□□□□ -1.79
TO15178 SNORA51.6-201ENST00000384151 125 ntBASIC3.89□□□□□ -1.79
TO15178 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TO15178 AL450338.1-201ENST00000407987 512 ntBASIC3.89□□□□□ -1.79
TO15178 RN7SKP182-201ENST00000410772 298 ntBASIC3.89□□□□□ -1.79
TO15178 Y_RNA.625-201ENST00000411256 107 ntBASIC3.89□□□□□ -1.79
TO15178 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.89□□□□□ -1.79
TO15178 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms