Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SDCBPO00560 AC087565.3-202ENST00000642085 1603 ntBASIC2.56□□□□□ -2
SDCBPO00560 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.56□□□□□ -2
SDCBPO00560 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.56□□□□□ -2
SDCBPO00560 XPOTP1-201ENST00000443317 2398 ntBASIC2.56□□□□□ -2
SDCBPO00560 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SDCBPO00560 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SDCBPO00560 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SDCBPO00560 RNU4-47P-201ENST00000410876 114 ntBASIC2.55□□□□□ -2
SDCBPO00560 RNA5SP344-201ENST00000411081 104 ntBASIC2.55□□□□□ -2
SDCBPO00560 AC093151.1-201ENST00000427711 313 ntBASIC2.55□□□□□ -2
SDCBPO00560 AC005300.1-201ENST00000428401 373 ntBASIC2.55□□□□□ -2
SDCBPO00560 AL390023.1-201ENST00000428836 262 ntBASIC2.55□□□□□ -2
SDCBPO00560 AC005326.1-201ENST00000429197 123 ntBASIC2.55□□□□□ -2
SDCBPO00560 AL031663.1-201ENST00000437445 219 ntBASIC2.55□□□□□ -2
SDCBPO00560 AC091862.1-201ENST00000438016 1100 ntBASIC2.55□□□□□ -2
SDCBPO00560 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.55□□□□□ -2
SDCBPO00560 AL591503.2-201ENST00000442314 1005 ntBASIC2.55□□□□□ -2
SDCBPO00560 ARL5AP2-201ENST00000444698 533 ntBASIC2.55□□□□□ -2
SDCBPO00560 Z75741.1-201ENST00000446793 314 ntBASIC2.55□□□□□ -2
SDCBPO00560 GAPDHP27-201ENST00000447427 1020 ntBASIC2.55□□□□□ -2
SDCBPO00560 C1DP3-201ENST00000455013 423 ntBASIC2.55□□□□□ -2
SDCBPO00560 BTF3P5-201ENST00000457252 467 ntBASIC2.55□□□□□ -2
SDCBPO00560 AC091153.1-201ENST00000466297 402 ntBASIC2.55□□□□□ -2
SDCBPO00560 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.55□□□□□ -2
SDCBPO00560 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.55□□□□□ -2
SDCBPO00560 HMGB3P15-201ENST00000507326 574 ntBASIC2.55□□□□□ -2
SDCBPO00560 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.55□□□□□ -2
SDCBPO00560 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.55□□□□□ -2
SDCBPO00560 AC117529.2-201ENST00000512159 2068 ntBASIC2.55□□□□□ -2
SDCBPO00560 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.55□□□□□ -2
SDCBPO00560 RN7SKP272-201ENST00000516988 232 ntBASIC2.55□□□□□ -2
SDCBPO00560 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.55□□□□□ -2
SDCBPO00560 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.55□□□□□ -2
SDCBPO00560 RPL12P22-201ENST00000519073 490 ntBASIC2.55□□□□□ -2
SDCBPO00560 AC022616.2-201ENST00000523185 300 ntBASIC2.55□□□□□ -2
SDCBPO00560 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.55□□□□□ -2
SDCBPO00560 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.55□□□□□ -2
SDCBPO00560 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.55□□□□□ -2
SDCBPO00560 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.55□□□□□ -2
SDCBPO00560 MIR5680-201ENST00000577577 84 ntBASIC2.55□□□□□ -2
SDCBPO00560 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.55□□□□□ -2
SDCBPO00560 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.55□□□□□ -2
SDCBPO00560 AC005021.1-201ENST00000608730 355 ntBASIC2.55□□□□□ -2
SDCBPO00560 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.55□□□□□ -2
SDCBPO00560 AC018692.3-201ENST00000623929 123 ntBASIC2.55□□□□□ -2
SDCBPO00560 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.55□□□□□ -2
SDCBPO00560 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.55□□□□□ -2
SDCBPO00560 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SDCBPO00560 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.54□□□□□ -2
SDCBPO00560 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SDCBPO00560 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SDCBPO00560 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SDCBPO00560 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.54□□□□□ -2
SDCBPO00560 RNU1-85P-201ENST00000364127 164 ntBASIC2.54□□□□□ -2
SDCBPO00560 RNA5SP267-201ENST00000364893 126 ntBASIC2.54□□□□□ -2
SDCBPO00560 AL031736.2-201ENST00000426573 787 ntBASIC2.54□□□□□ -2
SDCBPO00560 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.54□□□□□ -2
SDCBPO00560 MTCO1P43-201ENST00000431831 488 ntBASIC2.54□□□□□ -2
SDCBPO00560 NDUFA5P10-201ENST00000432147 357 ntBASIC2.54□□□□□ -2
SDCBPO00560 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.54□□□□□ -2
SDCBPO00560 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.54□□□□□ -2
SDCBPO00560 AC016696.1-201ENST00000446949 318 ntBASIC2.54□□□□□ -2
SDCBPO00560 AC239367.2-201ENST00000447309 705 ntBASIC2.54□□□□□ -2
SDCBPO00560 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.54□□□□□ -2
SDCBPO00560 NPM1P49-201ENST00000448027 714 ntBASIC2.54□□□□□ -2
SDCBPO00560 MTND2P8-201ENST00000450555 1025 ntBASIC2.54□□□□□ -2
SDCBPO00560 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.54□□□□□ -2
SDCBPO00560 AC089999.1-201ENST00000460336 374 ntBASIC2.54□□□□□ -2
SDCBPO00560 FTH1P2-201ENST00000466086 412 ntBASIC2.54□□□□□ -2
SDCBPO00560 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.54□□□□□ -2
SDCBPO00560 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.54□□□□□ -2
SDCBPO00560 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.54□□□□□ -2
SDCBPO00560 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.54□□□□□ -2
SDCBPO00560 MIR4429-201ENST00000580105 73 ntBASIC2.54□□□□□ -2
SDCBPO00560 AC115085.1-201ENST00000588924 229 ntBASIC2.54□□□□□ -2
SDCBPO00560 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.54□□□□□ -2
SDCBPO00560 AC009303.3-201ENST00000591103 736 ntBASIC2.54□□□□□ -2
SDCBPO00560 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.54□□□□□ -2
SDCBPO00560 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.54□□□□□ -2
SDCBPO00560 AC011468.4-201ENST00000603942 409 ntBASIC2.54□□□□□ -2
SDCBPO00560 RNA5SP108-201ENST00000605921 117 ntBASIC2.54□□□□□ -2
SDCBPO00560 AC005156.1-201ENST00000613371 573 ntBASIC2.54□□□□□ -2
SDCBPO00560 AC007318.2-201ENST00000620999 243 ntBASIC2.54□□□□□ -2
SDCBPO00560 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.54□□□□□ -2
SDCBPO00560 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.54□□□□□ -2
SDCBPO00560 FAM35CP-201ENST00000554755 2470 ntBASIC2.53□□□□□ -2
SDCBPO00560 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SDCBPO00560 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.53□□□□□ -2
SDCBPO00560 AL359715.4-201ENST00000606629 1436 ntBASIC2.53□□□□□ -2
SDCBPO00560 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.53□□□□□ -2
SDCBPO00560 OR5BR1P-201ENST00000524992 1330 ntBASIC2.53□□□□□ -2
SDCBPO00560 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.53□□□□□ -2
SDCBPO00560 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.53□□□□□ -2
SDCBPO00560 RNU6-317P-201ENST00000384031 107 ntBASIC2.53□□□□□ -2
SDCBPO00560 SNORA7.4-201ENST00000384249 137 ntBASIC2.53□□□□□ -2
SDCBPO00560 MIR181B1-201ENST00000385240 110 ntBASIC2.53□□□□□ -2
SDCBPO00560 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SDCBPO00560 AL158156.1-201ENST00000422509 473 ntBASIC2.53□□□□□ -2
SDCBPO00560 AL356806.1-201ENST00000422524 916 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms