Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AC017015.1-201ENST00000477387 286 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AC112198.4-201ENST00000515450 351 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 MIR2276-201ENST00000516886 89 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AC008562.1-201ENST00000521763 330 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AP003717.3-201ENST00000544832 1180 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AC027104.1-201ENST00000563702 681 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 ATP5F1P7-201ENST00000567330 760 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AC141257.3-201ENST00000572906 215 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 MIR5004-201ENST00000579078 107 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AC012493.2-201ENST00000595083 291 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 uc_338.1-201ENST00000612113 180 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AC006249.1-201ENST00000621223 471 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AP002371.2-201ENST00000624450 503 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AP003400.6-201ENST00000624698 740 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 AP001002.2-201ENST00000625137 386 ntBASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMIM28A0A1B0GU29 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 SEC63P2-201ENST00000503863 1939 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 U3.15-201ENST00000365398 212 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 RPL23AP48-201ENST00000406913 488 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AC092745.2-202ENST00000411880 369 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AL513174.1-201ENST00000423182 629 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 RPL23AP82-202ENST00000427528 469 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AL512649.1-201ENST00000428997 581 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 HMGB1P45-201ENST00000435986 653 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 FABP5P3-201ENST00000437960 408 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 MRPL35P4-201ENST00000453682 566 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 FGF7P3-201ENST00000454645 303 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 GTF2IP12-201ENST00000456547 356 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 RPL5P24-201ENST00000463742 885 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 CENPBD1P1-201ENST00000464061 469 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 RN7SKP82-201ENST00000516786 223 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 RN7SKP283-201ENST00000517197 270 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AP003355.1-201ENST00000518956 587 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 OR4A2P-201ENST00000527276 913 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AC124283.4-201ENST00000581815 456 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AC083899.3-201ENST00000603413 594 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 SNORD39.4-201ENST00000620099 78 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 AL590396.2-201ENST00000636511 1041 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SMIM28A0A1B0GU29 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.53□□□□□ -1.85
SMIM28A0A1B0GU29 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AC022031.1-201ENST00000585985 2593 ntBASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AL603766.1-201ENST00000407763 664 ntBASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 CYP4F29P-201ENST00000420685 446 ntBASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AC012065.2-201ENST00000421295 375 ntBASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AL031736.2-201ENST00000426573 787 ntBASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 CYCSP32-201ENST00000440548 321 ntBASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AC009263.1-201ENST00000441193 1239 ntBASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 RPL37P3-201ENST00000456825 293 ntBASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 RPL7P47-201ENST00000497299 556 ntBASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.52□□□□□ -1.85
SMIM28A0A1B0GU29 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms