Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 AL590135.1-201ENST00000422215 156 ntBASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 RPL7AP14-201ENST00000424041 802 ntBASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 snoU13.7-201ENST00000459220 104 ntBASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 HMGN1P9-201ENST00000515212 298 ntBASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 Y_RNA.708-201ENST00000516950 96 ntBASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 MIR4703-201ENST00000577728 79 ntBASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 AL732372.2-225ENST00000642124 456 ntBASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CUEDC1Q9NWM3 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CUEDC1Q9NWM3 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.43
CUEDC1Q9NWM3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
CUEDC1Q9NWM3 AC105235.1-201ENST00000623208 1816 ntBASIC6.15□□□□□ -1.43
CUEDC1Q9NWM3 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.15□□□□□ -1.43
CUEDC1Q9NWM3 HSPA8P18-201ENST00000439846 1928 ntBASIC6.15□□□□□ -1.43
CUEDC1Q9NWM3 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CUEDC1Q9NWM3 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CUEDC1Q9NWM3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.15□□□□□ -1.43
CUEDC1Q9NWM3 AC011755.1-201ENST00000623763 2049 ntBASIC6.15□□□□□ -1.43
CUEDC1Q9NWM3 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AL161781.1-201ENST00000354277 403 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 Y_RNA.14-201ENST00000362415 103 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 SNORA62.1-201ENST00000364287 154 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 RNU6-450P-201ENST00000364654 107 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 SNORA68.2-201ENST00000391263 128 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 UBE2V1P2-201ENST00000397758 440 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AL445529.1-201ENST00000398713 389 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 RNA5SP198-201ENST00000410376 127 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AC069218.2-201ENST00000411665 344 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AL133384.1-201ENST00000412744 351 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 RPL21P50-201ENST00000417698 477 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 COX6CP15-201ENST00000426313 211 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 MED13P1-201ENST00000428342 171 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 CEACAMP1-201ENST00000434624 1035 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AL451139.1-201ENST00000434718 346 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 H3F3BP1-201ENST00000440551 403 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 NANOGP10-201ENST00000453325 895 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AC005008.1-201ENST00000456151 612 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AP000893.1-201ENST00000474462 794 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AC011005.2-201ENST00000487324 359 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AC005726.1-201ENST00000494679 427 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 RNA5SP503-201ENST00000517047 117 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 OR5D17P-201ENST00000531492 978 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 MIR548AI-201ENST00000579940 88 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AL512782.1-201ENST00000603093 364 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AC092447.9-201ENST00000603395 144 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 OR6R2P-201ENST00000609216 300 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AL138960.1-201ENST00000613838 513 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 EIF3FP1-201ENST00000613970 806 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AC024255.1-201ENST00000614376 102 ntBASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms