Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 GTF2IP23-201ENST00000423746 351 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 NIPA2P1-201ENST00000426223 976 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 HMGN2P20-201ENST00000437531 273 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 PTGES3P5-201ENST00000455109 434 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 U3.44-201ENST00000458938 192 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 RPL23AP67-201ENST00000465341 474 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 AC084357.1-201ENST00000473404 255 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 AP000563.1-201ENST00000490865 758 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 NPM1P41-201ENST00000512920 831 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 RNU6-488P-201ENST00000515918 99 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 RNU6-202P-201ENST00000515998 96 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 RN7SKP21-201ENST00000516503 220 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 SNORA70.19-201ENST00000516717 90 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 RNU6-352P-201ENST00000516908 107 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 IGKV2D-36-201ENST00000518643 226 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 IGKV2D-19-201ENST00000523346 262 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 DUXAP6-201ENST00000553858 601 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 HSPE1P5-201ENST00000561489 272 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 AC107954.1-201ENST00000565906 727 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 AC009948.4-201ENST00000604692 675 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 AL731566.2-201ENST00000618971 317 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 AC093908.1-201ENST00000623125 8092 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 AP001350.1-201ENST00000601906 1524 ntBASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCNB1IP1Q9NPC3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
CCNB1IP1Q9NPC3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
CCNB1IP1Q9NPC3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 RNU6-796P-201ENST00000391086 107 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 MIR1193-201ENST00000408109 78 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 RPL23AP82-202ENST00000427528 469 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AP000907.1-201ENST00000428428 510 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AC093422.3-201ENST00000428506 305 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 ZFAND6P1-201ENST00000434138 605 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 ELOCP13-201ENST00000443934 329 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 RPL7P52-201ENST00000449200 742 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 Z99714.1-201ENST00000450463 807 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AC022034.3-201ENST00000471393 478 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 RPS27AP1-201ENST00000475545 471 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 KCTD9P5-201ENST00000504141 1170 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AC114967.1-201ENST00000504890 259 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 SNORA64.4-201ENST00000516632 81 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AC068657.1-201ENST00000520807 306 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AP004371.1-201ENST00000525240 214 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AC010198.2-201ENST00000550612 259 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AC037471.2-201ENST00000564941 598 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 ATP5F1P7-201ENST00000567330 760 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AC087499.8-201ENST00000578406 226 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AC107982.3-201ENST00000584957 985 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AC079880.2-201ENST00000603790 1213 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AC068831.8-201ENST00000620171 435 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 AL136164.4-201ENST00000625013 2135 ntBASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCNB1IP1Q9NPC3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 SNORA57.1-201ENST00000391227 145 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AL583834.1-201ENST00000406943 343 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms