Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 U3.22-201ENST00000391120 215 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 RNU6-192P-201ENST00000391253 100 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AL121978.1-201ENST00000402778 359 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 MTCO3P41-201ENST00000414801 328 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 RPS12P5-201ENST00000423449 371 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 CYCSP46-201ENST00000423569 204 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AC234779.1-201ENST00000425910 285 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 LARP1BP3-201ENST00000437229 869 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 MTND1P34-201ENST00000438556 671 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 ELOCP30-201ENST00000447108 299 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 KLRA1P-201ENST00000503499 986 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 RNU6-488P-201ENST00000515918 99 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AC008694.2-201ENST00000517591 306 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 OR6C7P-201ENST00000547875 934 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AC069240.1-201ENST00000548774 375 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AL391156.1-201ENST00000554965 554 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 BNIP3P5-201ENST00000562290 498 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AL139395.1-201ENST00000603662 160 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AC004492.1-201ENST00000607036 742 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AP001521.1-201ENST00000609150 300 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AL121873.1-201ENST00000616013 524 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AC068792.1-201ENST00000621354 417 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AC067931.1-201ENST00000624190 671 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AC114546.3-201ENST00000623582 1734 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 RPL21P132-201ENST00000331267 462 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 RNA5SP52-201ENST00000362448 134 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 VN1R8P-201ENST00000407739 893 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 PRELID3BP11-201ENST00000414230 479 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AC008280.1-201ENST00000418851 412 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 UBTFL3-201ENST00000418934 1024 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AL139095.3-201ENST00000419672 1203 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 RPS12P10-201ENST00000427031 377 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 RPS20P1-201ENST00000434853 354 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 MUPP-201ENST00000438111 566 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 UBE2V1P3-201ENST00000439651 417 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 COX6CP2-201ENST00000444980 225 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 TRGVB-201ENST00000453257 471 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 USP9YP10-201ENST00000454868 628 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 ARPC3P2-201ENST00000457786 533 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 UBTFL6-201ENST00000477929 1024 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AC083829.1-201ENST00000503756 657 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 CBX3P3-201ENST00000508108 532 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 USP9YP5-201ENST00000511770 630 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 RNA5SP154-201ENST00000516193 111 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AC008802.1-201ENST00000519121 791 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 MTCYBP20-201ENST00000524239 1129 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AP002963.1-201ENST00000530590 184 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AP001781.1-201ENST00000530977 207 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AC022880.1-201ENST00000534017 973 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 PSMB7P1-201ENST00000556349 514 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 KPNA2P3-201ENST00000584190 848 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 NF1P5-201ENST00000588287 448 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 U73023.1-201ENST00000603134 700 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AC008638.3-201ENST00000603341 463 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AC090948.2-201ENST00000607363 564 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AC104073.3-201ENST00000610942 955 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AC007546.2-201ENST00000623996 360 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AC006065.6-201ENST00000625201 545 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 AC006927.3-201ENST00000638789 384 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 NOL8P1-201ENST00000508336 3529 ntBASIC4.56□□□□□ -1.68
USP29Q9HBJ7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.56□□□□□ -1.68
USP29Q9HBJ7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms