Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RPL31P53-201ENST00000457065 348 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 BTF3P5-201ENST00000457252 467 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 AP000873.1-201ENST00000463987 400 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 Vault.1-201ENST00000516474 102 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 RN7SKP82-201ENST00000516786 223 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 EIF4EP5-201ENST00000528228 640 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 MIR2682-201ENST00000580305 110 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 AC100793.4-201ENST00000613683 429 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 AC009464.1-201ENST00000615731 469 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 AL592494.2-201ENST00000425455 1548 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 MTND5P24-201ENST00000438892 1767 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 AC107081.3-201ENST00000612715 2034 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 AP001148.1-201ENST00000624124 2359 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 MTCO1P24-201ENST00000515438 1558 ntBASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 RNA5SP293-201ENST00000410527 113 ntBASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 AC114967.1-201ENST00000504890 259 ntBASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 TXNP6-201ENST00000510190 310 ntBASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 AC027309.2-201ENST00000520566 192 ntBASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 AC010615.3-201ENST00000597319 394 ntBASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 AL354976.1-201ENST00000613843 387 ntBASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 AL162274.2-201ENST00000614406 332 ntBASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
UPF3BQ9BZI7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 AC138915.3-201ENST00000562908 1389 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 AF127577.6-201ENST00000623352 2191 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 RNA5SP383-201ENST00000362934 120 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 RNA5SP167-201ENST00000365461 116 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 RNU6-532P-201ENST00000384318 107 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 UBE2V1P2-201ENST00000397758 440 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 RNA5SP498-201ENST00000411342 120 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 AIMP1P1-201ENST00000418670 937 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 S100A11P2-201ENST00000467589 312 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 HIGD1AP1-201ENST00000550979 275 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 AC009303.3-201ENST00000591103 736 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 AC007687.1-201ENST00000602704 304 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 AL355816.1-201ENST00000607951 118 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 AL157817.1-201ENST00000614264 790 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 AC006386.2-201ENST00000624491 75 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 AC012005.1-201ENST00000624575 75 ntBASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.81□□□□□ -1.8
UPF3BQ9BZI7 AC092326.2-201ENST00000624772 1561 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 AC069540.1-201ENST00000446320 988 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 RNU7-27P-201ENST00000459281 62 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 AP001992.1-205ENST00000462248 379 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 SNRPGP3-201ENST00000469405 227 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 AC010285.3-201ENST00000511668 676 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 RNA5SP217-201ENST00000515959 91 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.8□□□□□ -1.8
UPF3BQ9BZI7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms