Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC3.21□□□□□ -1.9
LITAFQ99732 HMGB1P29-201ENST00000505659 499 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 SAP18P1-201ENST00000512058 390 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 AC016065.2-201ENST00000514530 444 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 RNA5SP228-201ENST00000516232 133 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 Y_RNA.672-201ENST00000516289 104 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 RNU6-941P-201ENST00000516346 108 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 RNU6-714P-201ENST00000516963 103 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 RNU6-201P-201ENST00000517100 61 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AC116917.1-201ENST00000520558 305 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC3.21□□□□□ -1.9
LITAFQ99732 AP003181.2-201ENST00000528941 181 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.21□□□□□ -1.9
LITAFQ99732 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LITAFQ99732 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC3.21□□□□□ -1.9
LITAFQ99732 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.21□□□□□ -1.9
LITAFQ99732 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.21□□□□□ -1.9
LITAFQ99732 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.21□□□□□ -1.9
LITAFQ99732 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.21□□□□□ -1.9
LITAFQ99732 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 BNIP3P30-201ENST00000601184 574 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 DUXAP4-201ENST00000603046 613 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AL357078.3-201ENST00000607528 618 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 RNU6-87P-201ENST00000607561 108 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LITAFQ99732 MLECP1-201ENST00000615893 709 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC3.21□□□□□ -1.9
LITAFQ99732 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 MIR3688-2-201ENST00000636963 87 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AC074101.1-201ENST00000637861 241 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LITAFQ99732 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LITAFQ99732 AC097714.1-201ENST00000511272 1647 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LITAFQ99732 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
LITAFQ99732 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LITAFQ99732 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.21□□□□□ -1.9
LITAFQ99732 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LITAFQ99732 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
LITAFQ99732 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.21□□□□□ -1.9
LITAFQ99732 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC3.21□□□□□ -1.9
LITAFQ99732 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.21□□□□□ -1.9
LITAFQ99732 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
LITAFQ99732 SLC9B1P1-201ENST00000331172 1337 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LITAFQ99732 RARSP1-201ENST00000542842 1418 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.2□□□□□ -1.9
LITAFQ99732 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
LITAFQ99732 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
LITAFQ99732 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LITAFQ99732 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LITAFQ99732 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LITAFQ99732 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LITAFQ99732 AL161781.1-201ENST00000354277 403 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 RNA5SP46-201ENST00000362370 120 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 SNORA70-201ENST00000384436 135 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 RNU6-146P-201ENST00000384602 108 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 AL034417.1-201ENST00000399343 800 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.2□□□□□ -1.9
LITAFQ99732 AL357515.1-201ENST00000402967 542 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 CCNG1P1-201ENST00000406783 885 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 MIR1277-201ENST00000408536 78 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.2□□□□□ -1.9
LITAFQ99732 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LITAFQ99732 RN7SKP86-201ENST00000410454 332 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 RNU4-55P-201ENST00000410731 137 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 OR6E1P-201ENST00000414424 923 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 RPL36AP36-201ENST00000418616 301 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 AC012065.2-201ENST00000421295 375 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 RPL12P34-201ENST00000424532 479 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.2□□□□□ -1.9
LITAFQ99732 AL035410.1-201ENST00000427409 427 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.2□□□□□ -1.9
LITAFQ99732 OR4F13P-201ENST00000428478 931 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 TIMM9P3-201ENST00000428659 274 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 AL353597.2-202ENST00000434901 373 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 AL353748.1-201ENST00000440753 474 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.2□□□□□ -1.9
LITAFQ99732 AL512326.1-201ENST00000443050 721 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 AL354714.3-201ENST00000447284 493 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 VN1R34P-201ENST00000447387 883 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 TCEA1P1-201ENST00000449716 880 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 IGHV5-78-201ENST00000450948 295 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 AC073476.1-201ENST00000452854 407 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 FABP3P2-201ENST00000453169 399 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 AC002553.2-201ENST00000453217 340 ntBASIC3.2□□□□□ -1.9
LITAFQ99732 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.2□□□□□ -1.9
LITAFQ99732 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.2□□□□□ -1.9
LITAFQ99732 Z92846.1-201ENST00000456203 268 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms