Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SIN3AQ96ST3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SIN3AQ96ST3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
SIN3AQ96ST3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SIN3AQ96ST3 SNORA63.1-201ENST00000362493 131 ntBASIC4.85□□□□□ -1.63
SIN3AQ96ST3 DNAJC19P6-201ENST00000401853 280 ntBASIC4.85□□□□□ -1.63
SIN3AQ96ST3 HMGN1P24-201ENST00000412282 298 ntBASIC4.85□□□□□ -1.63
SIN3AQ96ST3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.85□□□□□ -1.63
SIN3AQ96ST3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.85□□□□□ -1.63
SIN3AQ96ST3 LIPT1P1-201ENST00000415870 1186 ntBASIC4.85□□□□□ -1.63
SIN3AQ96ST3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.85□□□□□ -1.63
SIN3AQ96ST3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.85□□□□□ -1.63
SIN3AQ96ST3 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.85□□□□□ -1.63
SIN3AQ96ST3 ATP5C1P1-201ENST00000441945 895 ntBASIC4.85□□□□□ -1.63
SIN3AQ96ST3 EIF4A1P11-201ENST00000451239 222 ntBASIC4.85□□□□□ -1.63
SIN3AQ96ST3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.85□□□□□ -1.63
SIN3AQ96ST3 RPL6P9-201ENST00000466502 859 ntBASIC4.85□□□□□ -1.63
SIN3AQ96ST3 AC021205.2-201ENST00000480069 347 ntBASIC4.85□□□□□ -1.63
SIN3AQ96ST3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.85□□□□□ -1.63
SIN3AQ96ST3 PDCD5P1-201ENST00000543528 309 ntBASIC4.85□□□□□ -1.63
SIN3AQ96ST3 AL132857.1-201ENST00000555180 708 ntBASIC4.85□□□□□ -1.63
SIN3AQ96ST3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.85□□□□□ -1.63
SIN3AQ96ST3 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.85□□□□□ -1.63
SIN3AQ96ST3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.85□□□□□ -1.63
SIN3AQ96ST3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.85□□□□□ -1.63
SIN3AQ96ST3 AC055764.2-201ENST00000610089 670 ntBASIC4.85□□□□□ -1.63
SIN3AQ96ST3 AC019176.2-201ENST00000611579 315 ntBASIC4.85□□□□□ -1.63
SIN3AQ96ST3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.85□□□□□ -1.63
SIN3AQ96ST3 AC100871.1-201ENST00000507871 1456 ntBASIC4.85□□□□□ -1.63
SIN3AQ96ST3 SEC63P2-201ENST00000503863 1939 ntBASIC4.85□□□□□ -1.63
SIN3AQ96ST3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SIN3AQ96ST3 TNPO1P3-201ENST00000436471 2662 ntBASIC4.85□□□□□ -1.63
SIN3AQ96ST3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 RNU6-236P-201ENST00000363886 106 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 RPL7P27-201ENST00000403775 720 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC126124.2-201ENST00000413542 321 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AL449283.1-202ENST00000418249 604 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC092170.1-201ENST00000440211 356 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 OR10R1P-201ENST00000441524 1141 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC068135.1-201ENST00000446164 246 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC008264.1-201ENST00000447612 367 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC104687.1-201ENST00000485829 412 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC021146.1-201ENST00000511202 716 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 NCAPGP2-201ENST00000557911 754 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 MTCYBP23-201ENST00000558717 1102 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC095057.3-201ENST00000567102 1157 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC125494.3-201ENST00000602759 455 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 ELOCP35-201ENST00000604289 336 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC112220.2-201ENST00000605513 533 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC024060.1-201ENST00000607052 494 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 MIR7973-1-201ENST00000614683 76 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 uc_338.9-201ENST00000617424 182 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC024595.1-201ENST00000623088 387 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AC107027.3-201ENST00000565095 3473 ntBASIC4.84□□□□□ -1.63
SIN3AQ96ST3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIN3AQ96ST3 AF117829.1-206ENST00000621883 3802 ntBASIC4.84□□□□□ -1.64
SIN3AQ96ST3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 RHEBP3-201ENST00000411920 351 ntBASIC4.83□□□□□ -1.64
SIN3AQ96ST3 NANOGP5-201ENST00000424456 877 ntBASIC4.83□□□□□ -1.64
SIN3AQ96ST3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.83□□□□□ -1.64
SIN3AQ96ST3 MTCO3P21-201ENST00000430791 643 ntBASIC4.83□□□□□ -1.64
SIN3AQ96ST3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 RNU7-140P-201ENST00000459546 60 ntBASIC4.83□□□□□ -1.64
SIN3AQ96ST3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 AC011602.1-201ENST00000546484 331 ntBASIC4.83□□□□□ -1.64
SIN3AQ96ST3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 MIR4425-201ENST00000580572 84 ntBASIC4.83□□□□□ -1.64
SIN3AQ96ST3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 AL445435.1-201ENST00000604232 665 ntBASIC4.83□□□□□ -1.64
SIN3AQ96ST3 AC106052.1-201ENST00000608029 497 ntBASIC4.83□□□□□ -1.64
SIN3AQ96ST3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 uc_338.32-201ENST00000615087 172 ntBASIC4.83□□□□□ -1.64
SIN3AQ96ST3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 AP000770.2-201ENST00000623694 100 ntBASIC4.83□□□□□ -1.64
SIN3AQ96ST3 AL121594.5-201ENST00000631724 573 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms