Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 SCARNA22-201ENST00000503991 125 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC015795.1-201ENST00000513669 327 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC009812.2-201ENST00000517657 457 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC023050.3-201ENST00000541142 333 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC063950.1-201ENST00000552036 308 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AMZ2P1-203ENST00000565833 850 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 MIR3146-201ENST00000580367 79 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 RN7SL356P-201ENST00000582228 248 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC019176.2-201ENST00000611579 315 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AL353726.1-201ENST00000614041 1000 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC009233.1-201ENST00000616477 371 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 A2MP1-204ENST00000566278 4130 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 CUL9-202ENST00000372647 7684 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 RNU6-187P-201ENST00000384139 106 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 NCSTNP1-201ENST00000406229 144 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC016831.4-201ENST00000438302 307 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 RPS29P10-201ENST00000439197 166 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 RAB11AP1-201ENST00000442978 646 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC097493.1-201ENST00000463958 372 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 RPL21P126-201ENST00000470049 478 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC126389.1-201ENST00000477436 290 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 OR5H4P-201ENST00000510851 923 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 TBCAP3-201ENST00000512475 312 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC114797.1-201ENST00000514003 728 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 RN7SKP260-201ENST00000516907 149 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC105029.1-201ENST00000520250 669 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 COX6CP8-201ENST00000522620 226 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 LLPHP1-201ENST00000603571 367 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 SNORA35B-201ENST00000607417 129 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AP003400.3-201ENST00000624904 346 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AL008636.1-201ENST00000625038 1018 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 MGP-201ENST00000228938 694 ntTSL 3 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 Y_RNA.386-201ENST00000383913 105 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 RNU6-769P-201ENST00000384407 104 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 Y_RNA.520-201ENST00000384556 102 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 Y_RNA.597-201ENST00000410463 100 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 RPL23AP26-201ENST00000412728 464 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 TMA16P2-201ENST00000413187 601 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC083875.1-201ENST00000419509 405 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 EI24P4-201ENST00000423683 1078 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 MTCO1P20-201ENST00000425366 358 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AL596266.1-201ENST00000448132 400 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC233279.1-201ENST00000455300 423 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms