Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX18Q96RF0 AL450326.2-201ENST00000421913 1962 ntBASIC4.4□□□□□ -1.71
SNX18Q96RF0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX18Q96RF0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNX18Q96RF0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNX18Q96RF0 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.4□□□□□ -1.71
SNX18Q96RF0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC015813.6-201ENST00000624409 5808 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNX18Q96RF0 SNURFL-201ENST00000309296 343 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNX18Q96RF0 RN7SKP115-201ENST00000363177 317 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 RNU1-83P-201ENST00000363426 164 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 RNU6-1283P-201ENST00000365314 105 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 RNU6-1293P-201ENST00000384077 107 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 MIR93-201ENST00000385024 80 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 U8.14-201ENST00000390843 143 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 AL133384.1-201ENST00000412744 351 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 AL356583.2-201ENST00000426536 280 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC096632.1-201ENST00000427395 310 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC093414.1-201ENST00000434712 514 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 RPL37P21-201ENST00000435890 276 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC006466.1-201ENST00000438721 289 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 RPL23AP16-201ENST00000441715 421 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC011753.3-201ENST00000443436 406 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 RPS26P56-201ENST00000444468 240 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 HIGD1AP8-201ENST00000453927 274 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 SNORD42A-201ENST00000459584 64 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 RPS15AP17-201ENST00000470598 390 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 RPL23AP2-201ENST00000471227 466 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 AP000893.1-201ENST00000474462 794 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 MTND6P6-201ENST00000478031 263 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC083982.1-201ENST00000485679 344 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 AL358832.1-201ENST00000497800 389 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 FTH1P24-201ENST00000503502 462 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 RNA5SP43-201ENST00000516559 110 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 CDH12P4-201ENST00000517835 295 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 CDH12P3-201ENST00000517935 295 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 CDH12P1-201ENST00000518435 295 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 LSM6P2-201ENST00000552208 177 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 MIR4504-201ENST00000577413 92 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 MIR3934-201ENST00000579806 107 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 SLC25A36P1-201ENST00000590111 465 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC078899.5-201ENST00000612475 178 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 RNU6-156P-201ENST00000621869 107 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 AC019206.1-201ENST00000621938 425 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 AL603839.4-201ENST00000624658 1005 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 CRYM-AS1-204ENST00000637983 556 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNX18Q96RF0 MTND5P26-201ENST00000426018 1752 ntBASIC4.39□□□□□ -1.71
SNX18Q96RF0 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNX18Q96RF0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX18Q96RF0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX18Q96RF0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SNX18Q96RF0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX18Q96RF0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX18Q96RF0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNX18Q96RF0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNX18Q96RF0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX18Q96RF0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SNX18Q96RF0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX18Q96RF0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC008758.3-201ENST00000507003 1829 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX18Q96RF0 RNU6-777P-201ENST00000364265 104 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 Y_RNA.248-201ENST00000364501 109 ntBASIC4.38□□□□□ -1.71
SNX18Q96RF0 AC019155.1-201ENST00000382242 574 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms