Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC42Q96M95 HIGD1AP18-201ENST00000520730 278 ntBASIC3.27□□□□□ -1.89
CCDC42Q96M95 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC42Q96M95 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC42Q96M95 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC42Q96M95 AC006130.2-201ENST00000586202 326 ntBASIC3.27□□□□□ -1.89
CCDC42Q96M95 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC42Q96M95 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC42Q96M95 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CCDC42Q96M95 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC42Q96M95 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC42Q96M95 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC42Q96M95 AC009950.2-201ENST00000636548 183 ntBASIC3.27□□□□□ -1.89
CCDC42Q96M95 MTND5P3-201ENST00000438536 1800 ntBASIC3.27□□□□□ -1.89
CCDC42Q96M95 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC42Q96M95 API5P2-201ENST00000397055 1498 ntBASIC3.27□□□□□ -1.89
CCDC42Q96M95 AL049781.1-201ENST00000623195 3585 ntBASIC3.27□□□□□ -1.89
CCDC42Q96M95 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC42Q96M95 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC42Q96M95 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC42Q96M95 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 SNORA7.4-201ENST00000384249 137 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 SNORD67-201ENST00000390833 111 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 RNU6-244P-201ENST00000391028 104 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 RPL5P18-201ENST00000406671 891 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 XKRYP4-201ENST00000414395 483 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 RPL36AP36-201ENST00000418616 301 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 GOT2P5-201ENST00000433995 546 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 AC016696.1-201ENST00000446949 318 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 GAPDHP27-201ENST00000447427 1020 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 PDSS1P2-201ENST00000449397 678 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 XKRYP5-201ENST00000449659 483 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 RPL21P41-201ENST00000459863 264 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 RN7SL863P-201ENST00000462370 296 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 AC008155.2-201ENST00000464337 397 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 ATG10-AS1-201ENST00000504846 648 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 HMGB3P15-201ENST00000507326 574 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 AC090071.1-201ENST00000507713 644 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 AC023632.4-201ENST00000517783 191 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 SEC11B-201ENST00000518383 499 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 AC010615.3-201ENST00000597319 394 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 AP005212.4-201ENST00000614206 710 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 AC011472.4-201ENST00000615848 491 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 AC020763.5-201ENST00000623298 430 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 AC092184.1-201ENST00000625042 715 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 MIR622-201ENST00000638396 96 ntBASIC3.26□□□□□ -1.89
CCDC42Q96M95 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC42Q96M95 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CCDC42Q96M95 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC42Q96M95 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CCDC42Q96M95 RPS7P15-201ENST00000415804 584 ntBASIC3.25□□□□□ -1.89
CCDC42Q96M95 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC42Q96M95 AC011242.1-201ENST00000433596 1158 ntBASIC3.25□□□□□ -1.89
CCDC42Q96M95 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC42Q96M95 RPL21P8-201ENST00000465083 535 ntBASIC3.25□□□□□ -1.89
CCDC42Q96M95 RPS17P11-201ENST00000474297 293 ntBASIC3.25□□□□□ -1.89
CCDC42Q96M95 AC109925.1-201ENST00000478069 331 ntBASIC3.25□□□□□ -1.89
CCDC42Q96M95 RN7SL293P-201ENST00000481765 281 ntBASIC3.25□□□□□ -1.89
CCDC42Q96M95 RPL31P13-201ENST00000484151 370 ntBASIC3.25□□□□□ -1.89
CCDC42Q96M95 AC006499.5-201ENST00000505037 514 ntBASIC3.25□□□□□ -1.89
CCDC42Q96M95 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CCDC42Q96M95 RN7SKP282-201ENST00000516824 299 ntBASIC3.25□□□□□ -1.89
CCDC42Q96M95 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC42Q96M95 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC42Q96M95 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC42Q96M95 MTND4LP24-201ENST00000572277 291 ntBASIC3.25□□□□□ -1.89
CCDC42Q96M95 RN7SL339P-201ENST00000580597 296 ntBASIC3.25□□□□□ -1.89
CCDC42Q96M95 AC083760.1-201ENST00000589621 670 ntBASIC3.25□□□□□ -1.89
CCDC42Q96M95 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC42Q96M95 AC005021.1-201ENST00000608730 355 ntBASIC3.25□□□□□ -1.89
CCDC42Q96M95 AC007318.2-201ENST00000620999 243 ntBASIC3.25□□□□□ -1.89
CCDC42Q96M95 AC018692.3-201ENST00000623929 123 ntBASIC3.25□□□□□ -1.89
CCDC42Q96M95 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.25□□□□□ -1.89
CCDC42Q96M95 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC42Q96M95 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC42Q96M95 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC42Q96M95 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CCDC42Q96M95 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CCDC42Q96M95 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.24□□□□□ -1.89
CCDC42Q96M95 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC42Q96M95 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC42Q96M95 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC42Q96M95 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC42Q96M95 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms