Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC135001.1-201ENST00000544546 283 ntBASIC4.18□□□□□ -1.74
USP47Q96K76 AC068714.1-201ENST00000559623 800 ntBASIC4.18□□□□□ -1.74
USP47Q96K76 H3F3AP1-201ENST00000559984 334 ntBASIC4.18□□□□□ -1.74
USP47Q96K76 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.18□□□□□ -1.74
USP47Q96K76 AC010200.2-201ENST00000605098 235 ntBASIC4.18□□□□□ -1.74
USP47Q96K76 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.18□□□□□ -1.74
USP47Q96K76 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP47Q96K76 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP47Q96K76 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.18□□□□□ -1.74
USP47Q96K76 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
USP47Q96K76 AL583834.1-201ENST00000406943 343 ntBASIC4.17□□□□□ -1.74
USP47Q96K76 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.17□□□□□ -1.74
USP47Q96K76 ARL5AP3-201ENST00000439327 386 ntBASIC4.17□□□□□ -1.74
USP47Q96K76 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.17□□□□□ -1.74
USP47Q96K76 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.17□□□□□ -1.74
USP47Q96K76 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
USP47Q96K76 TXNP6-201ENST00000510190 310 ntBASIC4.17□□□□□ -1.74
USP47Q96K76 RN7SKP272-201ENST00000516988 232 ntBASIC4.17□□□□□ -1.74
USP47Q96K76 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.17□□□□□ -1.74
USP47Q96K76 OR5G4P-201ENST00000525251 760 ntBASIC4.17□□□□□ -1.74
USP47Q96K76 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.17□□□□□ -1.74
USP47Q96K76 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.17□□□□□ -1.74
USP47Q96K76 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.17□□□□□ -1.74
USP47Q96K76 AC123786.2-201ENST00000603459 275 ntBASIC4.17□□□□□ -1.74
USP47Q96K76 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
USP47Q96K76 AC005021.1-201ENST00000608730 355 ntBASIC4.17□□□□□ -1.74
USP47Q96K76 AC116447.1-201ENST00000613153 453 ntBASIC4.17□□□□□ -1.74
USP47Q96K76 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.17□□□□□ -1.74
USP47Q96K76 MIR7153-201ENST00000637758 57 ntBASIC4.17□□□□□ -1.74
USP47Q96K76 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USP47Q96K76 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP47Q96K76 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USP47Q96K76 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.17□□□□□ -1.74
USP47Q96K76 AL645568.2-201ENST00000432815 1337 ntBASIC4.17□□□□□ -1.74
USP47Q96K76 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP47Q96K76 MIR449A-201ENST00000362113 91 ntBASIC4.16□□□□□ -1.74
USP47Q96K76 BTF3P9-201ENST00000418784 283 ntBASIC4.16□□□□□ -1.74
USP47Q96K76 AL445528.1-201ENST00000426330 420 ntBASIC4.16□□□□□ -1.74
USP47Q96K76 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.16□□□□□ -1.74
USP47Q96K76 B3GNT2P1-201ENST00000434960 952 ntBASIC4.16□□□□□ -1.74
USP47Q96K76 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.16□□□□□ -1.74
USP47Q96K76 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.16□□□□□ -1.74
USP47Q96K76 DNAJC19P8-201ENST00000452887 259 ntBASIC4.16□□□□□ -1.74
USP47Q96K76 RPS17P11-201ENST00000474297 293 ntBASIC4.16□□□□□ -1.74
USP47Q96K76 METTL15P1-201ENST00000481421 1045 ntBASIC4.16□□□□□ -1.74
USP47Q96K76 RNA5SP356-201ENST00000515972 94 ntBASIC4.16□□□□□ -1.74
USP47Q96K76 IGKV2D-23-201ENST00000518179 286 ntBASIC4.16□□□□□ -1.74
USP47Q96K76 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.16□□□□□ -1.74
USP47Q96K76 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.16□□□□□ -1.74
USP47Q96K76 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.16□□□□□ -1.74
USP47Q96K76 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.16□□□□□ -1.74
USP47Q96K76 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
USP47Q96K76 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP47Q96K76 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.16□□□□□ -1.74
USP47Q96K76 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
USP47Q96K76 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP47Q96K76 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
USP47Q96K76 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
USP47Q96K76 MTND4LP20-201ENST00000402379 270 ntBASIC4.15□□□□□ -1.74
USP47Q96K76 RNU6-603P-201ENST00000411403 107 ntBASIC4.15□□□□□ -1.74
USP47Q96K76 IPMKP1-201ENST00000425988 855 ntBASIC4.15□□□□□ -1.74
USP47Q96K76 RAD1P2-201ENST00000446414 663 ntBASIC4.15□□□□□ -1.74
USP47Q96K76 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
USP47Q96K76 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.15□□□□□ -1.74
USP47Q96K76 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.15□□□□□ -1.74
USP47Q96K76 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.15□□□□□ -1.74
USP47Q96K76 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.15□□□□□ -1.74
USP47Q96K76 AC007566.2-201ENST00000603642 413 ntBASIC4.15□□□□□ -1.74
USP47Q96K76 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.15□□□□□ -1.74
USP47Q96K76 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.15□□□□□ -1.74
USP47Q96K76 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
USP47Q96K76 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.15□□□□□ -1.74
USP47Q96K76 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP47Q96K76 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.15□□□□□ -1.75
USP47Q96K76 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
USP47Q96K76 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP47Q96K76 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
USP47Q96K76 FTLP6-201ENST00000355274 422 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 MIR148B-201ENST00000362252 99 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AC019155.1-201ENST00000382242 574 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 U3.42-201ENST00000408746 214 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AL513175.1-201ENST00000431492 780 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 TXNP1-201ENST00000441872 371 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AC112653.1-201ENST00000443851 386 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 RPL7P59-201ENST00000447700 943 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 RN7SL633P-201ENST00000488974 297 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 VN1R104P-201ENST00000505115 1009 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AC034244.2-201ENST00000514668 858 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 RPL12P22-201ENST00000519073 490 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.14□□□□□ -1.75
USP47Q96K76 PDCD5P1-201ENST00000543528 309 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.14□□□□□ -1.75
USP47Q96K76 AC009268.1-201ENST00000561352 1203 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.14□□□□□ -1.75
USP47Q96K76 RPL23AP61-201ENST00000623642 466 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
USP47Q96K76 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP47Q96K76 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP47Q96K76 AC093831.2-201ENST00000624393 3427 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms