Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC092754.2-201ENST00000463506 460 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 MTCO3P28-201ENST00000513351 515 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 AC016065.2-201ENST00000514530 444 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 RNA5SP216-201ENST00000516111 123 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 AC008694.2-201ENST00000517591 306 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 OR4A45P-201ENST00000529954 901 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 OR7K1P-201ENST00000546439 926 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 MIR4284-201ENST00000578924 81 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 AC020914.6-201ENST00000594327 272 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 AC103792.1-201ENST00000603591 919 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 AC007566.2-201ENST00000603642 413 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 AL356218.2-201ENST00000605264 187 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 RNU6-88P-201ENST00000606801 100 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 AC091979.2-201ENST00000607514 214 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 AL138721.1-201ENST00000616756 179 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 BMS1P21-201ENST00000634565 365 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 AC127502.3-201ENST00000636170 1206 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 U6.101-201ENST00000637707 76 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 RPL21P132-201ENST00000331267 462 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AC068538.1-201ENST00000376856 336 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AC019155.1-201ENST00000382242 574 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 EIF5P1-201ENST00000400019 1231 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AL049693.1-201ENST00000402760 611 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AL031577.2-201ENST00000404133 280 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AL021407.1-201ENST00000404531 386 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AL024474.1-201ENST00000404655 591 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 RNA5SP146-201ENST00000410743 123 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 ELOCP19-201ENST00000411919 318 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 BX276092.4-201ENST00000452056 248 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 RPL23AP24-201ENST00000458203 385 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AC087385.1-201ENST00000475062 312 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 FAM172BP-201ENST00000487497 1089 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 RN7SL812P-201ENST00000493791 279 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 LTV1P1-201ENST00000510683 1237 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AC015795.1-201ENST00000513669 327 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 RN7SKP277-201ENST00000516895 283 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 MIR3915-201ENST00000578518 97 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AC090312.1-201ENST00000580637 348 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AC067852.4-201ENST00000590314 478 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 AP000843.1-201ENST00000624880 701 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 PCMTD1P7-201ENST00000634506 357 ntBASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.27□□□□□ -1.57
CHMP4CQ96CF2 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 AC130650.2-201ENST00000618736 2403 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 AC008033.1-201ENST00000216407 1162 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 Y_RNA.302-201ENST00000364997 102 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 RNA5SP151-201ENST00000365632 117 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 AL583835.1-201ENST00000399570 407 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 HSPD1P16-201ENST00000402302 394 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 RNU6-920P-201ENST00000410926 92 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 RPS20P14-201ENST00000412545 360 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 AC019178.2-201ENST00000423595 505 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 MTND1P20-201ENST00000430341 950 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 RPS3AP54-201ENST00000435535 734 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms