Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.73□□□□□ -1.81
PTP4A1Q93096 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.73□□□□□ -1.81
PTP4A1Q93096 AC091152.2-201ENST00000591628 2569 ntBASIC3.73□□□□□ -1.81
PTP4A1Q93096 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTP4A1Q93096 AP005901.5-201ENST00000545779 1796 ntBASIC3.73□□□□□ -1.81
PTP4A1Q93096 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PTP4A1Q93096 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTP4A1Q93096 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTP4A1Q93096 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTP4A1Q93096 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 RNU4-51P-201ENST00000364206 140 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 MTHFD2P2-201ENST00000407725 247 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 TCEA1P2-201ENST00000420496 906 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 MRPS36P1-201ENST00000421291 307 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AL590103.1-201ENST00000434488 307 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 RNF2P1-201ENST00000442955 1010 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 AL121871.1-201ENST00000443413 436 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 RFC5P1-201ENST00000454419 874 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 OR9M1P-201ENST00000459641 921 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 AL049829.1-201ENST00000465411 156 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 HMGB1P25-201ENST00000468402 607 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 RPL7L1P8-201ENST00000469911 741 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC006463.2-201ENST00000473326 348 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 RN7SL459P-201ENST00000481078 302 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC108734.3-201ENST00000481241 1165 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 RN7SL691P-201ENST00000494487 301 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 KLHL2P1-201ENST00000508691 521 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC093824.1-201ENST00000508796 343 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC093840.1-201ENST00000511599 336 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC105914.1-201ENST00000511798 226 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC108064.1-201ENST00000513791 460 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 RNU6-276P-201ENST00000516114 96 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 RNA5SP143-201ENST00000516936 115 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 NARSP2-201ENST00000518524 679 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 MTND1P6-201ENST00000523621 946 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 AP001636.2-201ENST00000525517 696 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 AP000619.3-201ENST00000535634 1127 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC125611.1-201ENST00000549563 229 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 TRAV15-201ENST00000556680 249 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC079171.1-201ENST00000568788 914 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 AL606834.3-201ENST00000602615 496 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC080013.4-201ENST00000607624 649 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AL158163.1-201ENST00000603915 1649 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 AC138915.3-201ENST00000562908 1389 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 CDR1-202ENST00000625883 1485 ntBASIC3.72□□□□□ -1.81
PTP4A1Q93096 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTP4A1Q93096 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.72□□□□□ -1.81
PTP4A1Q93096 AL645568.2-201ENST00000432815 1337 ntBASIC3.71□□□□□ -1.81
PTP4A1Q93096 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PTP4A1Q93096 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PTP4A1Q93096 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PTP4A1Q93096 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PTP4A1Q93096 RNU1-32P-201ENST00000363937 159 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 RNU6-173P-201ENST00000364215 104 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC011933.1-201ENST00000413334 321 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 LUZP4P1-201ENST00000415420 344 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 GLRXP1-201ENST00000423261 334 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 HMGB3P5-201ENST00000428894 612 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 GTF2IP3-201ENST00000433887 494 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 HMGN2P20-201ENST00000437531 273 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC092427.1-201ENST00000439177 601 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.71□□□□□ -1.82
PTP4A1Q93096 AL356535.1-201ENST00000440335 398 ntBASIC3.71□□□□□ -1.82
PTP4A1Q93096 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms