Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 PGBD4P4-201ENST00000509673 613 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 MTCO3P28-201ENST00000513351 515 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AC117532.1-201ENST00000514638 323 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AC135279.1-201ENST00000543493 504 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AC034105.4-201ENST00000568304 277 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AC136618.2-201ENST00000575091 400 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 MAGOH2P-202ENST00000584384 429 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 BNIP3P33-201ENST00000598912 569 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 BPIFA4P-203ENST00000603168 689 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 YWHAQP7-201ENST00000603536 658 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AC007566.2-201ENST00000603642 413 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AL022161.1-201ENST00000604390 213 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AC131238.1-201ENST00000617135 328 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AC073530.2-201ENST00000623987 261 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AC008785.1-201ENST00000624475 456 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AL596275.2-204ENST00000641628 552 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AL596275.2-206ENST00000641957 626 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 CR381670.1-201ENST00000624291 1693 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AL121972.1-201ENST00000402023 252 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AL359643.1-201ENST00000404109 423 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 SNORA11F-201ENST00000408237 128 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 RPS20P14-201ENST00000412545 360 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AL049610.1-201ENST00000423374 372 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 SNORA84-201ENST00000459229 133 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 RPL35P6-201ENST00000490024 372 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 RNA5SP216-201ENST00000516111 123 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 RNU6-150P-201ENST00000516237 95 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 HSPA8P13-201ENST00000523715 472 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AC090819.1-201ENST00000523800 1111 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AC087276.1-201ENST00000529659 480 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 NBR2-204ENST00000587322 63 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AC022916.3-201ENST00000592961 742 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AC079587.1-201ENST00000603846 277 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 MIR92B-201ENST00000607575 96 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AL159169.3-201ENST00000608871 561 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AC000123.2-201ENST00000623124 461 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AC127502.3-201ENST00000636170 1206 ntBASIC4.43□□□□□ -1.7
HMGB4Q8WW32 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
HMGB4Q8WW32 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 RNU6-660P-201ENST00000364566 109 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 RPL32P23-201ENST00000397237 405 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 DHFRP6-201ENST00000401776 268 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 RPL36AP36-201ENST00000418616 301 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 RPL7P30-201ENST00000420888 709 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 Z99497.1-201ENST00000421282 135 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AC098826.1-201ENST00000433943 471 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 USP9YP34-201ENST00000453983 808 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 RPL31P3-201ENST00000458430 332 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 RNU7-136P-201ENST00000458819 69 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 PABPC1P3-201ENST00000469174 459 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms