Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RPS20P25-201ENST00000412447 352 ntBASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 RFESDP1-201ENST00000422350 461 ntBASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 SRIP2-201ENST00000428470 166 ntBASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 AC105402.2-201ENST00000438503 358 ntBASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 RN7SL20P-201ENST00000488827 297 ntBASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 RNU4-18P-201ENST00000516751 149 ntBASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 AC008126.1-201ENST00000549019 480 ntBASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 AC090312.2-201ENST00000582687 378 ntBASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 VN1R81P-201ENST00000602085 372 ntBASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 AL390838.2-201ENST00000602394 274 ntBASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 AC007390.2-201ENST00000606229 3803 ntBASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 AC107308.1-201ENST00000615897 301 ntBASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 FAM133CP-201ENST00000332869 704 ntBASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 FTH1P1-201ENST00000437933 532 ntBASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 RPS24P13-201ENST00000442520 397 ntBASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 SNORA31.21-201ENST00000517180 77 ntBASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 AGGF1P8-201ENST00000562979 1000 ntBASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 PRELID3BP8-201ENST00000604148 295 ntBASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 CYCSP41-201ENST00000616920 296 ntBASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 AC093831.2-201ENST00000624393 3427 ntBASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.08□□□□□ -1.92
SHROOM3Q8TF72 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AL445529.1-201ENST00000398713 389 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AC110754.1-201ENST00000399740 601 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 RANP7-201ENST00000418085 644 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AL139281.1-201ENST00000422120 335 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 FDX1P2-201ENST00000450769 375 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 RPL31P50-201ENST00000471002 296 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AC110794.1-201ENST00000505816 425 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 TRAV11-201ENST00000539512 339 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AC091544.4-201ENST00000555268 342 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AC067805.1-201ENST00000559344 470 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 MIR4319-201ENST00000577285 85 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AC087241.4-201ENST00000612441 480 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AC231759.1-201ENST00000616455 597 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 OR5J1P-201ENST00000313544 939 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 RNU1-35P-201ENST00000362782 153 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AC098592.2-201ENST00000413158 265 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AL139132.1-201ENST00000431587 344 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 RPS29P6-201ENST00000438196 145 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 SAGE4P-201ENST00000442271 3381 ntBASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.07□□□□□ -1.92
SHROOM3Q8TF72 AC090229.1-201ENST00000590983 1609 ntBASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 AC107081.3-201ENST00000612715 2034 ntBASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 MTND5P19-201ENST00000424872 1794 ntBASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 RNU6-304P-201ENST00000364855 107 ntBASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 RPL7P25-201ENST00000404151 721 ntBASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 AC019097.1-201ENST00000424783 735 ntBASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 Z93242.1-201ENST00000427102 353 ntBASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 RSL24D1P2-201ENST00000445584 366 ntBASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 AL513124.1-201ENST00000450410 614 ntBASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 C1DP3-201ENST00000455013 423 ntBASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 MTCYBP14-201ENST00000457471 715 ntBASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 RPL23AP14-201ENST00000468281 468 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms