Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
ALMS1Q8TCU4 OR1S2-201ENST00000302592 978 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 SRIP2-201ENST00000428470 166 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC114781.4-201ENST00000513707 639 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 RNA5SP367-201ENST00000516557 118 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC007954.1-201ENST00000554198 494 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC006254.3-201ENST00000603353 884 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 MTND5P24-201ENST00000438892 1767 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 ELL2P4-201ENST00000446870 1376 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 RN7SKP220-201ENST00000410611 288 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 EEF1B2P7-201ENST00000451177 676 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 HIGD1AP13-201ENST00000509878 289 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC015871.2-201ENST00000603605 948 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC007566.2-201ENST00000603642 413 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AL645939.1-201ENST00000453429 797 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC138761.3-201ENST00000579993 334 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 BMS1P7-201ENST00000602440 1052 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 RNU6-859P-201ENST00000362728 107 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AL592295.2-201ENST00000612578 206 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 PLCE1P1-201ENST00000622094 305 ntBASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
ALMS1Q8TCU4 AC004972.1-201ENST00000623934 2209 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 MIR196B-201ENST00000384852 84 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 AL583834.1-201ENST00000406943 343 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 MRPS18BP2-201ENST00000434310 759 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 MIR6817-201ENST00000615588 66 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 AL590808.1-201ENST00000618696 141 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 SNORD15B-201ENST00000384714 146 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 MIR504-201ENST00000385065 83 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 AL445529.1-201ENST00000398713 389 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 NECAP1P2-201ENST00000455668 727 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 SNRPGP5-201ENST00000456003 220 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 AC025260.1-201ENST00000548858 430 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 AC090229.1-201ENST00000590983 1609 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 RNU6-851P-201ENST00000384565 107 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 MIR9-1-201ENST00000385198 89 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 ATP5F1P6-201ENST00000402768 767 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 RNA5SP21-201ENST00000410917 96 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 RPL12P26-201ENST00000452430 487 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 AC111000.2-201ENST00000507775 550 ntBASIC2.01□□□□□ -2.09
ALMS1Q8TCU4 IGKV2D-23-201ENST00000518179 286 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms