Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 OR8A2P-201ENST00000528631 952 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 OR5M2P-201ENST00000529003 936 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AP000889.2-201ENST00000532684 490 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AL389895.1-201ENST00000554127 252 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 MYL12BP1-201ENST00000569826 507 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 MIR4700-201ENST00000578311 74 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AC069307.1-201ENST00000602820 447 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AC008782.1-201ENST00000603386 430 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AP001521.1-201ENST00000609150 300 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AC015712.7-201ENST00000615211 635 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 RMST_9.1-201ENST00000619945 193 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AC018628.1-201ENST00000624147 3819 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 CYP4F35P-202ENST00000636121 390 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 OR2L1P-202ENST00000641567 1023 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AC046144.1-201ENST00000478559 1853 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 AC093909.5-201ENST00000621839 1799 ntBASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHKBP1Q8TBC3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AP001029.2-203ENST00000589795 4910 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AC144833.1-201ENST00000567953 4089 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 MIR133A2-201ENST00000347538 102 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AL121886.1-201ENST00000358609 435 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 Y_RNA.255-201ENST00000364581 97 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 RNU4-20P-201ENST00000365601 151 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 RNU1-149P-201ENST00000390870 161 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 RPL11P3-201ENST00000395256 523 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AL583835.1-201ENST00000399570 407 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AL359634.1-202ENST00000404721 284 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 RN7SKP125-201ENST00000410481 302 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 RPS12P24-201ENST00000412619 387 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AC127526.1-201ENST00000417526 366 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 RBMY2KP-201ENST00000418221 992 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 RPL7P4-203ENST00000430239 730 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 RPS27AP15-201ENST00000447672 466 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AL645937.3-201ENST00000453647 936 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AL389915.2-201ENST00000454576 441 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 MTCO3P10-201ENST00000455912 772 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 RNU7-63P-201ENST00000459054 62 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 RPL7P22-201ENST00000466005 733 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AC010301.1-201ENST00000473936 355 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 ATP5LP5-201ENST00000483050 299 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 TMEM248P1-201ENST00000510579 951 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 OR5D15P-201ENST00000531671 942 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AC011468.4-201ENST00000603942 409 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 uc_338.15-201ENST00000615470 191 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 AP002512.4-202ENST00000641599 4530 ntBASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHKBP1Q8TBC3 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 OR55B1P-203ENST00000641518 2602 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 RNU6-379P-201ENST00000363813 104 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 RN7SKP186-201ENST00000365371 303 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 RNU6-108P-201ENST00000365558 107 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 AL121834.1-202ENST00000404494 277 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 PSMD10P3-201ENST00000437000 448 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 RPS4XP10-201ENST00000465034 731 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms