Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AC113195.1-201ENST00000579952 141 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 TPMTP1-201ENST00000592307 737 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AC074101.1-201ENST00000637861 241 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AC079776.5-201ENST00000641920 211 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.4
NEDD1Q8NHV4 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
NEDD1Q8NHV4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.34□□□□□ -1.4
NEDD1Q8NHV4 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.34□□□□□ -1.4
NEDD1Q8NHV4 MTND5P30-201ENST00000452896 1731 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 DDX18P6-201ENST00000450119 1997 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AC004076.2-201ENST00000620532 3323 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 C4BPAP1-201ENST00000415474 1893 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 Y_RNA.255-201ENST00000364581 97 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 Y_RNA.396-201ENST00000383949 103 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 SNORA67-201ENST00000384423 137 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 RN7SKP17-201ENST00000411242 351 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AC127526.1-201ENST00000417526 366 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AL807761.1-201ENST00000417622 171 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AC093655.2-201ENST00000425735 631 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AL356276.2-201ENST00000435919 558 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AC073465.2-201ENST00000440938 498 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 MTND3P16-201ENST00000452205 344 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 HSPE1P22-201ENST00000456856 327 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 MEMO1P3-201ENST00000459811 302 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AC005532.2-201ENST00000467154 373 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AC092754.1-201ENST00000472975 479 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 RN7SL222P-201ENST00000476452 299 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 GLUD1P3-202ENST00000508551 200 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 RNU6-408P-201ENST00000515910 100 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 SNORA25.10-201ENST00000515926 124 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 Y_RNA.682-201ENST00000516457 100 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 RNU6-885P-201ENST00000516607 104 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 HMGB1P6-201ENST00000569046 646 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AC007448.1-201ENST00000582714 234 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AC110743.1-201ENST00000584870 478 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AC069307.1-201ENST00000602820 447 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AL139124.1-201ENST00000609123 421 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AC141273.2-201ENST00000618989 130 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 AC091903.1-201ENST00000624322 454 ntBASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NEDD1Q8NHV4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AL078621.3-201ENST00000623707 2042 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 RNU6-99P-201ENST00000364721 107 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 SNORD56.6-201ENST00000384569 71 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 MIR105-2-201ENST00000385083 81 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 MIR514A2-201ENST00000385131 88 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 MIR514A3-201ENST00000385132 88 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 RNU1-149P-201ENST00000390870 161 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 MRPL42P2-201ENST00000403169 426 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 SNORA11C-201ENST00000408532 129 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 RNU4-34P-201ENST00000410431 124 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AC080125.1-201ENST00000414888 684 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AL356968.1-201ENST00000416622 474 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AL353093.1-201ENST00000441292 436 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AC092809.1-201ENST00000441469 474 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 RPL7P22-201ENST00000466005 733 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 RPL22P13-201ENST00000493291 347 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 RNA5SP135-201ENST00000517019 125 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AC022882.1-201ENST00000532142 501 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms