Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNU6-253P-201ENST00000384730 105 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 RNA5SP36-201ENST00000410197 133 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 USP9YP33-201ENST00000412220 421 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC004552.1-201ENST00000419089 348 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 RPS15AP40-201ENST00000419621 391 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AL365338.1-201ENST00000422282 858 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AL390023.1-201ENST00000428836 262 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AL035407.1-201ENST00000429211 571 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AL132765.1-201ENST00000434165 553 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 USP9YP35-201ENST00000435696 412 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 VN1R10P-201ENST00000447106 875 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC092757.1-201ENST00000467293 467 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 RPS26P3-201ENST00000470205 348 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC090543.2-201ENST00000483963 348 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC004057.1-201ENST00000485827 348 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC104685.1-201ENST00000502445 371 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC025445.1-201ENST00000502728 300 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC111000.2-201ENST00000507775 550 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 MTCYBP37-201ENST00000510642 1133 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 RNA5SP519-201ENST00000516480 119 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 MIR2116-201ENST00000517221 80 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC087373.1-201ENST00000524920 491 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC135628.1-201ENST00000568867 534 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC008759.1-201ENST00000589783 983 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC008638.3-201ENST00000603341 463 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC010201.1-201ENST00000605051 540 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AL591034.3-201ENST00000605511 685 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC078899.5-201ENST00000612475 178 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AL445363.3-201ENST00000623080 671 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AL079343.1-201ENST00000572358 1771 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC087359.1-201ENST00000508335 1740 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 OR10J6P-201ENST00000289731 930 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 RNA5SP307-201ENST00000362863 116 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 Y_RNA.126-201ENST00000363382 111 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 RPL23AP29-201ENST00000397284 453 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AL022722.2-201ENST00000402519 180 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 BTBD10P2-201ENST00000404779 676 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 RN7SKP235-201ENST00000410662 305 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 SNORA74C-2-201ENST00000411179 201 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 PIGPP2-201ENST00000411569 458 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 MTCYBP38-201ENST00000417160 1123 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AL157831.1-201ENST00000426134 473 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AC008065.1-201ENST00000428525 348 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 MTND4P6-201ENST00000438297 472 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 MTND6P18-201ENST00000439477 513 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AL512326.1-201ENST00000443050 721 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 RPL39P6-201ENST00000448289 150 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 RPL23AP35-201ENST00000451906 501 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 USP9YP10-201ENST00000454868 628 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AL122001.1-201ENST00000457027 370 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 RPS7P7-201ENST00000463499 571 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 RPS3AP43-201ENST00000479743 781 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 AC108078.3-201ENST00000502633 489 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 RNF138P1-201ENST00000502765 546 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 MTCYBP17-201ENST00000503579 789 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.97□□□□□ -1.77
BEST3Q8N1M1 USP9YP5-201ENST00000511770 630 ntBASIC3.97□□□□□ -1.77
BEST3Q8N1M1 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms