Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNU6-1122P-201ENST00000384449 107 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 RSL24D1P1-201ENST00000404972 493 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 RNU2-42P-201ENST00000410697 113 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 RN7SKP33-201ENST00000410942 340 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 FNDC3CP-201ENST00000420795 1155 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AC016712.1-201ENST00000431088 378 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AL358472.1-201ENST00000431295 329 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 MTND4P6-201ENST00000438297 472 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 EEF1A1P39-201ENST00000440791 250 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 RFC5P1-201ENST00000454419 874 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 snoU109.4-201ENST00000458953 143 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AL672167.3-201ENST00000465951 960 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 UQCRHP4-201ENST00000471686 272 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 RPS27AP13-201ENST00000498403 237 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AC026412.2-201ENST00000512270 1075 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 MIR2114-201ENST00000516645 80 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 OR10V3P-201ENST00000525712 725 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 RFPL1S-203ENST00000539579 330 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AC125611.1-201ENST00000549563 229 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 CBX3P5-201ENST00000552017 521 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AL121603.1-201ENST00000553815 142 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AC025884.1-201ENST00000556034 378 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 PARP1P2-201ENST00000556806 195 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 VN1R83P-201ENST00000595685 445 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AL020997.2-201ENST00000602607 184 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AC011816.2-201ENST00000607089 556 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AP001521.1-201ENST00000609150 300 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AC005962.2-201ENST00000611427 652 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 LINC02211-204ENST00000642024 1070 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 AL133383.2-201ENST00000622958 2336 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 MARK2P15-201ENST00000432204 2186 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC244517.1-201ENST00000606030 2086 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 MTCO1P23-201ENST00000415223 1526 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 RNA5SP258-201ENST00000362750 119 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 RNU5D-1-201ENST00000363299 116 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 SNORA40.2-201ENST00000390847 128 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 OR6C69P-201ENST00000394268 893 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AL136310.1-201ENST00000404926 654 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 CRYBB2P1-203ENST00000415709 538 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 RAD23BP2-201ENST00000416003 1207 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC106883.1-201ENST00000418805 562 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC073143.1-201ENST00000436316 395 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 HMGB1P12-201ENST00000438594 598 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AF228730.2-201ENST00000438784 848 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 RPS23P7-201ENST00000466210 444 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC105137.1-201ENST00000484355 562 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 MTCO3P35-201ENST00000485582 781 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AF213884.1-201ENST00000488102 463 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AP001086.1-201ENST00000494882 321 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC109458.1-201ENST00000508858 316 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC093840.1-201ENST00000511599 336 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 RNU7-143P-201ENST00000516781 65 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 RNU6-1073P-201ENST00000517182 106 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AP001207.2-201ENST00000519490 539 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms