Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 AC005592.1-201ENST00000566527 1640 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 AL158163.1-201ENST00000603915 1649 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 RNU1-35P-201ENST00000362782 153 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 RNU1-49P-201ENST00000363468 159 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 Y_RNA.489-201ENST00000384410 101 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 RNU6-1050P-201ENST00000410388 107 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 RPL7P10-201ENST00000417407 739 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 AC008267.5-201ENST00000424928 265 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 AL360081.1-201ENST00000428299 555 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 AL669831.1-202ENST00000428504 417 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 HMGB1P12-201ENST00000438594 598 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 RPS15AP27-201ENST00000449183 343 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 RPL23AP60-201ENST00000450011 454 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 AL034399.1-201ENST00000451535 380 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 HMGB3P21-201ENST00000452483 547 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 AC104472.2-201ENST00000469035 601 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 RNU6-1092P-201ENST00000516955 87 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 AC087854.1-201ENST00000519706 414 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 AC018889.1-201ENST00000605372 397 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 U2.17-201ENST00000611454 95 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 FAM157A-202ENST00000615155 405 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 GABPAP-201ENST00000419271 1356 ntBASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PRPF38BQ5VTL8 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 AL445437.1-201ENST00000623157 3087 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 AC022819.1-201ENST00000563495 3910 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 RNU6-490P-201ENST00000362985 107 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 RNA5SP65-201ENST00000363166 119 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 RN7SKP128-201ENST00000364270 303 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 RNVU1-3-201ENST00000364313 161 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 Y_RNA.307-201ENST00000365022 117 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 Y_RNA.428-201ENST00000384078 102 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 RNU6-432P-201ENST00000384196 109 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 Y_RNA.473-201ENST00000384333 102 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 SNORA48.7-201ENST00000391302 135 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 AC069213.2-201ENST00000420238 366 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 AC093106.2-201ENST00000428212 385 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 CALM2P2-201ENST00000428512 440 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 AC236972.1-201ENST00000433225 199 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 RPS23P6-201ENST00000466136 431 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 RN7SL269P-201ENST00000467795 305 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 RN7SL459P-201ENST00000481078 302 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 PGAM1P13-201ENST00000507497 754 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 RNU6-470P-201ENST00000515954 104 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 SNORD116.3-201ENST00000517176 78 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 AP001858.2-201ENST00000536213 601 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 MIR3941-201ENST00000582572 103 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 AC008745.1-201ENST00000604064 271 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 AC243312.2-201ENST00000623340 601 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 AC092079.1-201ENST00000558620 1985 ntBASIC6.65□□□□□ -1.34
PRPF38BQ5VTL8 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.35
PRPF38BQ5VTL8 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
PRPF38BQ5VTL8 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PRPF38BQ5VTL8 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PRPF38BQ5VTL8 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PRPF38BQ5VTL8 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.65□□□□□ -1.35
PRPF38BQ5VTL8 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
PRPF38BQ5VTL8 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PRPF38BQ5VTL8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms