Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AL391813.2-201ENST00000609113 322 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AP000432.2-201ENST00000624164 2048 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AP006245.1-201ENST00000522549 120 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 DPRXP4-201ENST00000578053 568 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 RPL7P54-201ENST00000438336 674 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AC069285.2-201ENST00000440210 275 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AC128716.1-201ENST00000475129 166 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AC006445.2-201ENST00000510061 472 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 IGKV2D-36-201ENST00000518643 226 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 IGLV3-26-201ENST00000520756 302 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AL359219.2-201ENST00000555184 348 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 Z82195.1-201ENST00000604558 398 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 SNORA26.9-201ENST00000391322 122 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 GSTA12P-201ENST00000402398 508 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 RNU2-52P-201ENST00000410680 190 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC012123.2-201ENST00000485809 248 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 FAM92A1P2-202ENST00000504766 877 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC114967.1-201ENST00000504890 259 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC087854.1-201ENST00000519706 414 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC100770.1-201ENST00000532310 322 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 TRAV15-201ENST00000556680 249 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AL606537.1-201ENST00000607258 2011 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 ZNF542P-204ENST00000482727 1305 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 SNORA36C-201ENST00000384289 132 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 LUZP4P1-201ENST00000415420 344 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC011742.1-201ENST00000431448 434 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC087312.1-201ENST00000471411 480 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC096947.1-201ENST00000603233 470 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC104662.1-201ENST00000604448 511 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC015922.4-201ENST00000612568 690 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC233309.1-201ENST00000619522 751 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC022513.1-201ENST00000624512 117 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC091152.2-201ENST00000591628 2569 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AL590290.1-201ENST00000405336 380 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC092809.1-201ENST00000441469 474 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC083906.5-201ENST00000503722 328 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 RFPL4AP3-201ENST00000515267 345 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 RNA5SP116-201ENST00000516132 98 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC009318.2-201ENST00000610917 651 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AL773545.4-201ENST00000637262 310 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AL513478.4-201ENST00000641636 310 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 RNA5SP139-201ENST00000364340 117 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 RPL23AP42-201ENST00000471152 471 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC069499.1-201ENST00000489433 509 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 FAM92A1P1-201ENST00000528023 890 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AC007620.3-201ENST00000608131 497 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 AL031658.2-201ENST00000616850 651 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 RNA5SP439-201ENST00000617595 124 ntBASIC1.68□□□□□ -2.14
UBR4Q5T4S7 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 OR5BR1P-201ENST00000524992 1330 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 AL512633.1-201ENST00000399931 655 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 BTG3P1-201ENST00000435859 716 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 AC010655.1-201ENST00000449336 292 ntBASIC1.67□□□□□ -2.14
UBR4Q5T4S7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC1.67□□□□□ -2.14
UBR4Q5T4S7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms