Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 NOTCH2P1-201ENST00000443481 624 ntBASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 MTCO3P16-201ENST00000454456 754 ntBASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 UBDP1-202ENST00000457888 382 ntBASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 OR5H5P-201ENST00000503164 928 ntBASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 RNA5SP135-201ENST00000517019 125 ntBASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 ARL2BPP5-201ENST00000523141 481 ntBASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 BRDTP1-201ENST00000605735 677 ntBASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 HMGN2P28-201ENST00000606102 262 ntBASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 AL391497.1-201ENST00000608671 547 ntBASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 AC008121.2-201ENST00000614647 523 ntBASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 AC244205.2-202ENST00000635781 342 ntBASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LDLRAP1Q5SW96 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 MAPK10-372ENST00000641954 3413 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 RNU6-335P-201ENST00000364563 113 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 OR1L1-202ENST00000373686 1083 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 MIR554-201ENST00000384874 96 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 MIR607-201ENST00000385241 96 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 TAF13P2-201ENST00000416876 286 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 AC027644.1-201ENST00000419595 298 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 AC022034.3-201ENST00000471393 478 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 SYPL1P1-201ENST00000473622 768 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 UBE2CP3-201ENST00000502715 450 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 AC091860.1-201ENST00000505723 432 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 HMGN1P11-201ENST00000508668 303 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 NDUFB4P9-201ENST00000511646 388 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 HMGN1P15-201ENST00000513870 295 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 OR7E13P-201ENST00000526052 910 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 AP000790.1-201ENST00000528891 737 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 AL133457.1-201ENST00000564251 987 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 CYP2C60P-201ENST00000566088 139 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 SNRPGP15-201ENST00000600149 222 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 RNU1-30P-201ENST00000606575 163 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 AC018926.1-201ENST00000616335 435 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 AC006249.1-201ENST00000621223 471 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 MIR4278-201ENST00000636094 69 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 AP000553.6-201ENST00000641242 118 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 OTUD4P1-201ENST00000237841 3067 ntBASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LDLRAP1Q5SW96 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 RNU6-236P-201ENST00000363886 106 ntBASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 U8.11-201ENST00000384699 133 ntBASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 U8.12-201ENST00000384701 133 ntBASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 SNORA40.4-201ENST00000390971 128 ntBASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 AL139098.1-201ENST00000407291 389 ntBASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 RNA5SP56-201ENST00000410277 118 ntBASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 AL445584.1-201ENST00000431451 330 ntBASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 AL035246.1-201ENST00000433554 1255 ntBASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.67□□□□□ -1.82
LDLRAP1Q5SW96 AC234064.1-201ENST00000436312 247 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms