Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 MIR3611-201ENST00000584484 83 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 VN1R85P-201ENST00000601587 426 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AP003465.2-201ENST00000602571 373 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AL596327.1-201ENST00000603629 213 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AL133338.2-201ENST00000604292 736 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AC018695.5-201ENST00000605872 315 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AP002360.4-201ENST00000606980 481 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AL031775.1-201ENST00000607014 887 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AC023043.4-201ENST00000612081 449 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AL590240.3-201ENST00000621416 943 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AC015908.5-201ENST00000623289 343 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 AL356596.1-201ENST00000624230 379 ntBASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC44A4Q53GD3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
SLC44A4Q53GD3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.64
SLC44A4Q53GD3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
SLC44A4Q53GD3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SLC44A4Q53GD3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 RNU6-1215P-201ENST00000384441 102 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 SNORA70C-201ENST00000384538 135 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 RNU6-178P-201ENST00000384631 104 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 SNORA68.2-201ENST00000391263 128 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AL356387.2-201ENST00000422272 243 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AL953862.1-201ENST00000423016 168 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AL049610.1-201ENST00000423374 372 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 RPS12P5-201ENST00000423449 371 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 RPS24P1-201ENST00000438550 371 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 MTND1P30-201ENST00000441241 901 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 H2AFZP5-201ENST00000446960 382 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 RPL39P6-201ENST00000448289 150 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 FGF7P3-201ENST00000454645 303 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 RN7SL817P-201ENST00000480777 288 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AC090071.1-201ENST00000507713 644 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 STMN1P2-201ENST00000508435 439 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AC022447.1-201ENST00000515358 464 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 RNU6-720P-201ENST00000516363 108 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AC008802.1-201ENST00000519121 791 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 GTF2IP22-201ENST00000554443 182 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AC115286.1-201ENST00000604298 434 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AC106028.5-201ENST00000610332 395 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AC114781.5-201ENST00000615297 108 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AL160394.1-201ENST00000624765 724 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AC127502.3-201ENST00000636170 1206 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 AC018529.3-201ENST00000624212 2254 ntBASIC4.83□□□□□ -1.64
SLC44A4Q53GD3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 DDX18P3-201ENST00000404856 2007 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AC107027.3-201ENST00000565095 3473 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 SNORA71.2-201ENST00000364941 134 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 RNU1-64P-201ENST00000365443 163 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 RNA5SP88-201ENST00000365560 109 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 Y_RNA.517-201ENST00000384551 106 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 MIR23B-201ENST00000384832 97 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 RNU2-21P-201ENST00000410368 188 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 MTCYBP5-201ENST00000423752 1135 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AL158073.1-201ENST00000426848 1104 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 AL451139.1-201ENST00000434718 346 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 MTND1P4-201ENST00000435196 415 ntBASIC4.82□□□□□ -1.64
SLC44A4Q53GD3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms