Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RPS26P15-201ENST00000488067 348 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 RN7SL504P-201ENST00000494496 287 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 HSPA8P19-201ENST00000505359 1517 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 BTF3L4P4-201ENST00000506381 449 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 MTND5P11-201ENST00000511037 1812 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 RN7SKP209-201ENST00000516888 304 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AC018555.1-201ENST00000567548 1980 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AP000919.1-202ENST00000581139 1264 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 ZNF415P1-201ENST00000582279 1166 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AL160281.1-201ENST00000605307 311 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AC026741.1-201ENST00000605892 482 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AC006023.2-201ENST00000609916 167 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 GABPAP-201ENST00000419271 1356 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 SNORA7.2-201ENST00000364446 145 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC234772.1-201ENST00000377927 937 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 MIR607-201ENST00000385241 96 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC063979.1-201ENST00000415539 377 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 OR1AA1P-201ENST00000419597 916 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 RPL7P29-201ENST00000437151 728 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC092809.1-201ENST00000441469 474 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 RPL23AP33-201ENST00000442301 452 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AL049829.1-201ENST00000465411 156 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC073522.1-201ENST00000483312 377 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 PHBP14-201ENST00000512887 367 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 RNU6-334P-201ENST00000517072 102 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC113192.3-201ENST00000529152 742 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC011611.1-201ENST00000552179 197 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC005476.1-201ENST00000554427 397 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 KLKP1-201ENST00000595979 403 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC011374.2-201ENST00000607135 526 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AL513477.2-201ENST00000607858 568 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 MIR8057-201ENST00000620957 69 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC018816.2-201ENST00000621460 353 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC097372.4-201ENST00000625025 466 ntBASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.07□□□□□ -1.76
SHROOM1Q2M3G4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 AF127577.6-201ENST00000623352 2191 ntBASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 SAGE4P-201ENST00000442271 3381 ntBASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 RNA5SP374-201ENST00000362939 125 ntBASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 RNA5SP391-201ENST00000363456 119 ntBASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 RPF2P1-201ENST00000424137 906 ntBASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 UBE2D3P3-201ENST00000426992 425 ntBASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 EXTL2P1-201ENST00000446218 416 ntBASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 RPL7P55-201ENST00000450522 746 ntBASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 RPL21P13-201ENST00000488305 481 ntBASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 OR5H3P-201ENST00000502817 919 ntBASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 AC021678.1-201ENST00000505195 936 ntBASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 AC008489.1-201ENST00000524271 483 ntBASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.06□□□□□ -1.76
SHROOM1Q2M3G4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms