Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.73□□□□□ -1.81
SCN1BQ07699 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.73□□□□□ -1.81
SCN1BQ07699 MRPS35P3-201ENST00000603189 709 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 RNU4-5P-201ENST00000607255 135 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 AC243773.3-201ENST00000613270 256 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 AC100827.5-201ENST00000615883 426 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 AC069209.1-201ENST00000619282 651 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 AP005019.3-201ENST00000620418 560 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.73□□□□□ -1.81
SCN1BQ07699 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.73□□□□□ -1.81
SCN1BQ07699 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.73□□□□□ -1.81
SCN1BQ07699 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.73□□□□□ -1.81
SCN1BQ07699 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SCN1BQ07699 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SCN1BQ07699 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.72□□□□□ -1.81
SCN1BQ07699 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SCN1BQ07699 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SCN1BQ07699 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SCN1BQ07699 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SCN1BQ07699 RNU6-1122P-201ENST00000384449 107 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 RNA5SP397-201ENST00000391323 118 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.72□□□□□ -1.81
SCN1BQ07699 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.72□□□□□ -1.81
SCN1BQ07699 AL356320.2-201ENST00000417263 507 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.72□□□□□ -1.81
SCN1BQ07699 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.72□□□□□ -1.81
SCN1BQ07699 AC013410.2-201ENST00000422627 201 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 RPL7AP25-201ENST00000423357 805 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 AC019178.2-201ENST00000423595 505 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 AC093698.1-201ENST00000423843 571 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 NANOGP5-201ENST00000424456 877 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 AC092648.1-201ENST00000425870 423 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 AC096638.2-201ENST00000434965 711 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.72□□□□□ -1.81
SCN1BQ07699 AC004854.1-201ENST00000440356 349 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 MTND2P20-201ENST00000440805 661 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SCN1BQ07699 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.72□□□□□ -1.81
SCN1BQ07699 NECAP1P2-201ENST00000455668 727 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SCN1BQ07699 RN7SL93P-201ENST00000463035 293 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.72□□□□□ -1.81
SCN1BQ07699 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.72□□□□□ -1.81
SCN1BQ07699 AC068305.1-201ENST00000497406 726 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.72□□□□□ -1.81
SCN1BQ07699 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.72□□□□□ -1.81
SCN1BQ07699 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SCN1BQ07699 RNY4P37-201ENST00000516225 96 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.72□□□□□ -1.81
SCN1BQ07699 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.72□□□□□ -1.81
SCN1BQ07699 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SCN1BQ07699 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.72□□□□□ -1.81
SCN1BQ07699 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.72□□□□□ -1.81
SCN1BQ07699 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.72□□□□□ -1.81
SCN1BQ07699 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.72□□□□□ -1.81
SCN1BQ07699 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.72□□□□□ -1.81
SCN1BQ07699 AC244505.7-201ENST00000599675 272 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 AC020910.2-201ENST00000603635 610 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.72□□□□□ -1.81
SCN1BQ07699 AC069304.2-201ENST00000605154 435 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 AL034351.1-201ENST00000605288 668 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 AC016877.3-201ENST00000606778 504 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 AC090425.2-201ENST00000608818 501 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.72□□□□□ -1.81
SCN1BQ07699 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.72□□□□□ -1.81
SCN1BQ07699 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
SCN1BQ07699 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SCN1BQ07699 AC066616.2-201ENST00000559334 1481 ntBASIC3.72□□□□□ -1.81
SCN1BQ07699 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.72□□□□□ -1.81
SCN1BQ07699 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SCN1BQ07699 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SCN1BQ07699 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.71□□□□□ -1.82
SCN1BQ07699 AC106754.1-201ENST00000562632 1513 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
SCN1BQ07699 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.71□□□□□ -1.82
SCN1BQ07699 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SCN1BQ07699 ZNF29P-201ENST00000225587 168 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SCN1BQ07699 DEFB109C-201ENST00000382575 264 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 DEFB109B-201ENST00000382656 264 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 SNORD3H-201ENST00000384486 214 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SCN1BQ07699 Z98941.1-201ENST00000407764 100 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.71□□□□□ -1.82
SCN1BQ07699 AC245052.5-201ENST00000416320 649 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.71□□□□□ -1.82
SCN1BQ07699 UQCRBP1-201ENST00000421129 336 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SCN1BQ07699 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.71□□□□□ -1.82
SCN1BQ07699 AL050321.1-201ENST00000432363 400 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.71□□□□□ -1.82
SCN1BQ07699 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SCN1BQ07699 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.71□□□□□ -1.82
SCN1BQ07699 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.71□□□□□ -1.82
SCN1BQ07699 Z95327.1-201ENST00000446082 482 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 MTCO3P20-201ENST00000454926 688 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 RPL35AP28-201ENST00000459730 331 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 RPL35AP15-201ENST00000468042 339 ntBASIC3.71□□□□□ -1.82
SCN1BQ07699 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms