Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 OR8K2P-201ENST00000524645 927 ntBASIC3.94□□□□□ -1.78
COL16A1Q07092 AP003122.3-201ENST00000526316 255 ntBASIC3.94□□□□□ -1.78
COL16A1Q07092 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL16A1Q07092 AC025423.2-201ENST00000537570 439 ntBASIC3.94□□□□□ -1.78
COL16A1Q07092 AL442163.2-201ENST00000553912 710 ntBASIC3.94□□□□□ -1.78
COL16A1Q07092 SERPINE4P-201ENST00000554978 281 ntBASIC3.94□□□□□ -1.78
COL16A1Q07092 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.94□□□□□ -1.78
COL16A1Q07092 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.94□□□□□ -1.78
COL16A1Q07092 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
COL16A1Q07092 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
COL16A1Q07092 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL16A1Q07092 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
COL16A1Q07092 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL16A1Q07092 AC002524.1-201ENST00000411687 547 ntBASIC3.93□□□□□ -1.78
COL16A1Q07092 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.93□□□□□ -1.78
COL16A1Q07092 AC073310.1-201ENST00000423226 1033 ntBASIC3.93□□□□□ -1.78
COL16A1Q07092 AL591806.2-201ENST00000433122 173 ntBASIC3.93□□□□□ -1.78
COL16A1Q07092 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.93□□□□□ -1.78
COL16A1Q07092 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.93□□□□□ -1.78
COL16A1Q07092 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.93□□□□□ -1.78
COL16A1Q07092 RNU1-143P-201ENST00000516296 146 ntBASIC3.93□□□□□ -1.78
COL16A1Q07092 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.93□□□□□ -1.78
COL16A1Q07092 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.93□□□□□ -1.78
COL16A1Q07092 AC011270.1-201ENST00000558606 583 ntBASIC3.93□□□□□ -1.78
COL16A1Q07092 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.93□□□□□ -1.78
COL16A1Q07092 BNIP3P39-201ENST00000601077 554 ntBASIC3.93□□□□□ -1.78
COL16A1Q07092 AC007566.2-201ENST00000603642 413 ntBASIC3.93□□□□□ -1.78
COL16A1Q07092 KATNBL1P1-201ENST00000605192 748 ntBASIC3.93□□□□□ -1.78
COL16A1Q07092 U1.23-201ENST00000610293 146 ntBASIC3.93□□□□□ -1.78
COL16A1Q07092 RNU1-68P-201ENST00000615382 146 ntBASIC3.93□□□□□ -1.78
COL16A1Q07092 U1.39-201ENST00000621562 146 ntBASIC3.93□□□□□ -1.78
COL16A1Q07092 AC079298.2-201ENST00000623885 459 ntBASIC3.93□□□□□ -1.78
COL16A1Q07092 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.93□□□□□ -1.78
COL16A1Q07092 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.93□□□□□ -1.78
COL16A1Q07092 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
COL16A1Q07092 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL16A1Q07092 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL16A1Q07092 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
COL16A1Q07092 YWHAEP5-201ENST00000431545 765 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 HMGB3P12-201ENST00000438745 556 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 RAD1P2-201ENST00000446414 663 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 MIR4738-201ENST00000579134 87 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.92□□□□□ -1.78
COL16A1Q07092 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.92□□□□□ -1.78
COL16A1Q07092 AC074276.2-201ENST00000619891 348 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 AC006840.1-201ENST00000623069 542 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.92□□□□□ -1.78
COL16A1Q07092 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL16A1Q07092 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL16A1Q07092 AC008725.1-201ENST00000605123 2263 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.92□□□□□ -1.78
COL16A1Q07092 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.92□□□□□ -1.78
COL16A1Q07092 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
COL16A1Q07092 AC007336.1-201ENST00000576365 3828 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL16A1Q07092 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
COL16A1Q07092 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
COL16A1Q07092 MIR592-201ENST00000384959 97 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 SNORA81-201ENST00000408493 178 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 SETP15-201ENST00000412724 337 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.92□□□□□ -1.78
COL16A1Q07092 AL031736.2-201ENST00000426573 787 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.92□□□□□ -1.78
COL16A1Q07092 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.92□□□□□ -1.78
COL16A1Q07092 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.92□□□□□ -1.78
COL16A1Q07092 RPL23AP71-201ENST00000470966 469 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.92□□□□□ -1.78
COL16A1Q07092 SNORD116-30-201ENST00000516468 85 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 RNA5SP148-201ENST00000516527 94 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 MIR2276-201ENST00000516886 89 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.92□□□□□ -1.78
COL16A1Q07092 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.92□□□□□ -1.78
COL16A1Q07092 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.92□□□□□ -1.78
COL16A1Q07092 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.92□□□□□ -1.78
COL16A1Q07092 AC017076.1-201ENST00000607613 578 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 AC022509.4-201ENST00000621404 572 ntBASIC3.92□□□□□ -1.78
COL16A1Q07092 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL16A1Q07092 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL16A1Q07092 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL16A1Q07092 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL16A1Q07092 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL16A1Q07092 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
COL16A1Q07092 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL16A1Q07092 MIR30E-201ENST00000362104 92 ntBASIC3.91□□□□□ -1.78
COL16A1Q07092 RNU4-23P-201ENST00000362839 140 ntBASIC3.91□□□□□ -1.78
COL16A1Q07092 Y_RNA.110-201ENST00000363220 99 ntBASIC3.91□□□□□ -1.78
COL16A1Q07092 MIR512-1-201ENST00000384913 84 ntBASIC3.91□□□□□ -1.78
COL16A1Q07092 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC3.91□□□□□ -1.78
COL16A1Q07092 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.91□□□□□ -1.78
COL16A1Q07092 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.91□□□□□ -1.78
COL16A1Q07092 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.91□□□□□ -1.78
COL16A1Q07092 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.91□□□□□ -1.78
COL16A1Q07092 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL16A1Q07092 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.91□□□□□ -1.78
COL16A1Q07092 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.91□□□□□ -1.78
COL16A1Q07092 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.91□□□□□ -1.78
COL16A1Q07092 DNAJC19P3-201ENST00000594491 331 ntBASIC3.91□□□□□ -1.78
COL16A1Q07092 AL713998.2-201ENST00000604538 1198 ntBASIC3.91□□□□□ -1.78
COL16A1Q07092 AC015813.4-201ENST00000610469 179 ntBASIC3.91□□□□□ -1.78
COL16A1Q07092 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms