Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CBX1P83916 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.59□□□□□ -1.83
CBX1P83916 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CBX1P83916 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CBX1P83916 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
CBX1P83916 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.58□□□□□ -1.84
CBX1P83916 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.58□□□□□ -1.84
CBX1P83916 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CBX1P83916 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CBX1P83916 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CBX1P83916 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CBX1P83916 SNORA7.2-201ENST00000364446 145 ntBASIC3.58□□□□□ -1.84
CBX1P83916 RNU6-335P-201ENST00000364563 113 ntBASIC3.58□□□□□ -1.84
CBX1P83916 RNU6-1226P-201ENST00000384317 107 ntBASIC3.58□□□□□ -1.84
CBX1P83916 SNORA46-201ENST00000384762 135 ntBASIC3.58□□□□□ -1.84
CBX1P83916 MIR607-201ENST00000385241 96 ntBASIC3.58□□□□□ -1.84
CBX1P83916 MIR937-201ENST00000401271 86 ntBASIC3.58□□□□□ -1.84
CBX1P83916 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.58□□□□□ -1.84
CBX1P83916 RPL32P35-201ENST00000415214 394 ntBASIC3.58□□□□□ -1.84
CBX1P83916 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.58□□□□□ -1.84
CBX1P83916 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CBX1P83916 MTND2P16-201ENST00000419987 799 ntBASIC3.58□□□□□ -1.84
CBX1P83916 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.58□□□□□ -1.84
CBX1P83916 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.58□□□□□ -1.84
CBX1P83916 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.58□□□□□ -1.84
CBX1P83916 RPL23AP38-201ENST00000423801 469 ntBASIC3.58□□□□□ -1.84
CBX1P83916 COX6CP15-201ENST00000426313 211 ntBASIC3.58□□□□□ -1.84
CBX1P83916 AL390879.2-203ENST00000426943 1121 ntBASIC3.58□□□□□ -1.84
CBX1P83916 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.58□□□□□ -1.84
CBX1P83916 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CBX1P83916 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.58□□□□□ -1.84
CBX1P83916 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.58□□□□□ -1.84
CBX1P83916 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.58□□□□□ -1.84
CBX1P83916 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.58□□□□□ -1.84
CBX1P83916 AL513533.1-201ENST00000453728 415 ntBASIC3.58□□□□□ -1.84
CBX1P83916 AC022034.3-201ENST00000471393 478 ntBASIC3.58□□□□□ -1.84
CBX1P83916 RPL31P13-201ENST00000484151 370 ntBASIC3.58□□□□□ -1.84
CBX1P83916 AC041039.1-201ENST00000485656 536 ntBASIC3.58□□□□□ -1.84
CBX1P83916 AC104057.1-201ENST00000515547 497 ntBASIC3.58□□□□□ -1.84
CBX1P83916 RNU6-579P-201ENST00000516879 102 ntBASIC3.58□□□□□ -1.84
CBX1P83916 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.58□□□□□ -1.84
CBX1P83916 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CBX1P83916 OR7E13P-201ENST00000526052 910 ntBASIC3.58□□□□□ -1.84
CBX1P83916 AP000926.4-201ENST00000527351 454 ntBASIC3.58□□□□□ -1.84
CBX1P83916 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.58□□□□□ -1.84
CBX1P83916 AC007536.1-201ENST00000533382 349 ntBASIC3.58□□□□□ -1.84
CBX1P83916 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CBX1P83916 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.58□□□□□ -1.84
CBX1P83916 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.58□□□□□ -1.84
CBX1P83916 AC068831.4-201ENST00000556118 109 ntBASIC3.58□□□□□ -1.84
CBX1P83916 AL157394.1-201ENST00000562983 1224 ntBASIC3.58□□□□□ -1.84
CBX1P83916 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.58□□□□□ -1.84
CBX1P83916 AC012119.1-201ENST00000603184 222 ntBASIC3.58□□□□□ -1.84
CBX1P83916 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.58□□□□□ -1.84
CBX1P83916 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.58□□□□□ -1.84
CBX1P83916 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.58□□□□□ -1.84
CBX1P83916 AL121890.3-201ENST00000618494 516 ntBASIC3.58□□□□□ -1.84
CBX1P83916 AF001550.2-201ENST00000636643 217 ntBASIC3.58□□□□□ -1.84
CBX1P83916 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CBX1P83916 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CBX1P83916 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CBX1P83916 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CBX1P83916 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CBX1P83916 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CBX1P83916 RNU6-374P-201ENST00000364146 108 ntBASIC3.57□□□□□ -1.84
CBX1P83916 U8.9-201ENST00000365667 134 ntBASIC3.57□□□□□ -1.84
CBX1P83916 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CBX1P83916 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.57□□□□□ -1.84
CBX1P83916 HSPE1P26-201ENST00000405341 275 ntBASIC3.57□□□□□ -1.84
CBX1P83916 AL031121.1-201ENST00000406553 254 ntBASIC3.57□□□□□ -1.84
CBX1P83916 TPT1P2-201ENST00000413105 503 ntBASIC3.57□□□□□ -1.84
CBX1P83916 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.57□□□□□ -1.84
CBX1P83916 BX664727.1-201ENST00000416024 466 ntBASIC3.57□□□□□ -1.84
CBX1P83916 Z97055.1-201ENST00000419730 712 ntBASIC3.57□□□□□ -1.84
CBX1P83916 AC246680.2-201ENST00000422106 389 ntBASIC3.57□□□□□ -1.84
CBX1P83916 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.57□□□□□ -1.84
CBX1P83916 AC114973.1-201ENST00000429057 632 ntBASIC3.57□□□□□ -1.84
CBX1P83916 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.57□□□□□ -1.84
CBX1P83916 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.57□□□□□ -1.84
CBX1P83916 HMGN3P1-201ENST00000453847 193 ntBASIC3.57□□□□□ -1.84
CBX1P83916 RN7SL459P-201ENST00000481078 302 ntBASIC3.57□□□□□ -1.84
CBX1P83916 RN7SL499P-201ENST00000481141 276 ntBASIC3.57□□□□□ -1.84
CBX1P83916 AC121161.1-201ENST00000510606 652 ntBASIC3.57□□□□□ -1.84
CBX1P83916 IGKV2D-36-201ENST00000518643 226 ntBASIC3.57□□□□□ -1.84
CBX1P83916 OR8K4P-201ENST00000534608 872 ntBASIC3.57□□□□□ -1.84
CBX1P83916 AC092470.1-201ENST00000546187 132 ntBASIC3.57□□□□□ -1.84
CBX1P83916 AC107954.1-201ENST00000565906 727 ntBASIC3.57□□□□□ -1.84
CBX1P83916 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.57□□□□□ -1.84
CBX1P83916 BPTFP1-201ENST00000579209 492 ntBASIC3.57□□□□□ -1.84
CBX1P83916 AC124283.4-201ENST00000581815 456 ntBASIC3.57□□□□□ -1.84
CBX1P83916 MIR4715-201ENST00000584117 79 ntBASIC3.57□□□□□ -1.84
CBX1P83916 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.57□□□□□ -1.84
CBX1P83916 AC026741.1-201ENST00000605892 482 ntBASIC3.57□□□□□ -1.84
CBX1P83916 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CBX1P83916 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CBX1P83916 PLCE1P1-201ENST00000622094 305 ntBASIC3.57□□□□□ -1.84
CBX1P83916 AP000346.3-201ENST00000622821 210 ntBASIC3.57□□□□□ -1.84
CBX1P83916 AC097372.4-201ENST00000625025 466 ntBASIC3.57□□□□□ -1.84
CBX1P83916 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.57□□□□□ -1.84
CBX1P83916 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms