Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
NKX6-1P78426 Y_RNA.41-201ENST00000362646 102 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 Y_RNA.46-201ENST00000362695 102 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 RNU6-359P-201ENST00000365466 108 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 Y_RNA.516-201ENST00000384541 124 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 MIR192-201ENST00000384915 110 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 MIR105-1-201ENST00000385222 81 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 U3.29-201ENST00000391296 212 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NKX6-1P78426 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.55□□□□□ -1.68
NKX6-1P78426 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.55□□□□□ -1.68
NKX6-1P78426 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NKX6-1P78426 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX6-1P78426 C1DP2-201ENST00000418167 426 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 RPL36AP36-201ENST00000418616 301 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX6-1P78426 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX6-1P78426 AC005517.2-201ENST00000424673 553 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX6-1P78426 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX6-1P78426 RPL34P6-201ENST00000432390 345 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 ELOCP18-201ENST00000434209 337 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 AC108734.1-201ENST00000439549 399 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.55□□□□□ -1.68
NKX6-1P78426 RPL17P49-201ENST00000443728 411 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.55□□□□□ -1.68
NKX6-1P78426 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX6-1P78426 CEACAMP6-201ENST00000452007 574 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX6-1P78426 AP000797.2-201ENST00000475768 606 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX6-1P78426 RPS24P16-201ENST00000497294 392 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 AC010460.1-201ENST00000507087 466 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX6-1P78426 HMGN1P9-201ENST00000515212 298 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.55□□□□□ -1.68
NKX6-1P78426 AC022360.1-201ENST00000521058 340 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX6-1P78426 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX6-1P78426 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.55□□□□□ -1.68
NKX6-1P78426 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX6-1P78426 MTATP6P3-201ENST00000581686 676 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX6-1P78426 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX6-1P78426 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX6-1P78426 AC098614.4-201ENST00000607601 462 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 AC010632.3-201ENST00000611377 369 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 AC013476.2-201ENST00000614456 459 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 U6atac.1-201ENST00000616025 117 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 AC079597.1-201ENST00000624306 508 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX6-1P78426 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX6-1P78426 MTCO1P24-201ENST00000515438 1558 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 AC104118.1-201ENST00000607625 1589 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NKX6-1P78426 AC022893.2-201ENST00000564832 3296 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX6-1P78426 AC095050.2-201ENST00000510748 1458 ntBASIC4.55□□□□□ -1.68
NKX6-1P78426 BTBD10P1-201ENST00000549824 1352 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 AC092747.4-201ENST00000620519 1861 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
NKX6-1P78426 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX6-1P78426 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NKX6-1P78426 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NKX6-1P78426 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX6-1P78426 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX6-1P78426 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX6-1P78426 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
NKX6-1P78426 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX6-1P78426 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX6-1P78426 RN7SKP104-201ENST00000362605 328 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 U3.3-201ENST00000362986 216 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 RNU6-356P-201ENST00000384140 107 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 Y_RNA.493-201ENST00000384422 102 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX6-1P78426 MRPL42P2-201ENST00000403169 426 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.54□□□□□ -1.68
NKX6-1P78426 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX6-1P78426 OR2B7P-201ENST00000429302 934 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX6-1P78426 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX6-1P78426 EZH2P1-201ENST00000431167 291 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 AC091390.1-201ENST00000433904 331 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 MTATP6P13-201ENST00000438531 667 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 RPL23AP33-201ENST00000442301 452 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 AL590399.6-201ENST00000446396 307 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.54□□□□□ -1.68
NKX6-1P78426 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.54□□□□□ -1.68
NKX6-1P78426 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX6-1P78426 RPL7P15-201ENST00000461190 712 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 AC146507.1-201ENST00000468335 354 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 ST13P14-201ENST00000474095 734 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
NKX6-1P78426 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX6-1P78426 IGBP1P4-201ENST00000503202 879 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.54□□□□□ -1.68
NKX6-1P78426 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
NKX6-1P78426 AC006390.1-201ENST00000508068 283 ntBASIC4.54□□□□□ -1.68
NKX6-1P78426 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms