Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC104454.1-201ENST00000421341 1401 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.13□□□□□ -1.75
RPS3AP61247 OR4G11P-202ENST00000642116 1414 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPS3AP61247 AC095050.2-201ENST00000510748 1458 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 OR56B2P-202ENST00000641377 2453 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.13□□□□□ -1.75
RPS3AP61247 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RPS3AP61247 RNU6-931P-201ENST00000363850 107 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RPS3AP61247 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RPS3AP61247 RNU1-89P-201ENST00000384592 164 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.13□□□□□ -1.75
RPS3AP61247 RSL24D1P4-201ENST00000400938 484 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 RNA5SP239-201ENST00000410218 129 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 RNU4-78P-201ENST00000410940 126 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 AC009480.2-201ENST00000422916 432 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 RPS6P12-201ENST00000432491 726 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 AL008629.1-201ENST00000438615 184 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.13□□□□□ -1.75
RPS3AP61247 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.13□□□□□ -1.75
RPS3AP61247 ARPC3P5-201ENST00000448802 534 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.13□□□□□ -1.75
RPS3AP61247 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.13□□□□□ -1.75
RPS3AP61247 ISCUP1-201ENST00000454451 448 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 MTND2P28-201ENST00000457540 1044 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 AL139824.2-201ENST00000458731 1095 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 snoU13.1-201ENST00000459157 104 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.13□□□□□ -1.75
RPS3AP61247 AC078817.1-201ENST00000492623 435 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.13□□□□□ -1.75
RPS3AP61247 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.13□□□□□ -1.75
RPS3AP61247 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPS3AP61247 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.13□□□□□ -1.75
RPS3AP61247 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPS3AP61247 RFPL1S-203ENST00000539579 330 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 EEF1B2P4-201ENST00000551398 348 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.13□□□□□ -1.75
RPS3AP61247 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.13□□□□□ -1.75
RPS3AP61247 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.13□□□□□ -1.75
RPS3AP61247 AC009094.1-201ENST00000564443 426 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 MIR5186-201ENST00000577504 120 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 MIR6748-201ENST00000610433 71 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 AL450489.1-201ENST00000612071 468 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RPS3AP61247 AC040168.1-201ENST00000623594 991 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RPS3AP61247 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.13□□□□□ -1.75
RPS3AP61247 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPS3AP61247 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RPS3AP61247 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RPS3AP61247 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPS3AP61247 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPS3AP61247 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RPS3AP61247 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
RPS3AP61247 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.13□□□□□ -1.75
RPS3AP61247 DDX43P2-201ENST00000604753 1354 ntBASIC4.13□□□□□ -1.75
RPS3AP61247 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPS3AP61247 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.13□□□□□ -1.75
RPS3AP61247 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.13□□□□□ -1.75
RPS3AP61247 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPS3AP61247 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPS3AP61247 AL356473.1-201ENST00000406203 1408 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPS3AP61247 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RPS3AP61247 RNA5SP443-201ENST00000363083 132 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 SNORA4.1-201ENST00000364263 144 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 RNA5SP332-201ENST00000391063 115 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPS3AP61247 AIMP1P1-201ENST00000418670 937 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 AC005005.2-201ENST00000420779 380 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 CENPIP1-201ENST00000425713 902 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.12□□□□□ -1.75
RPS3AP61247 RPS12P10-201ENST00000427031 377 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 PSMA6P3-201ENST00000428242 164 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 YWHAZP7-201ENST00000436906 631 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 MTCYBP34-201ENST00000439552 670 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 AL445669.2-201ENST00000454425 421 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.12□□□□□ -1.75
RPS3AP61247 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.12□□□□□ -1.75
RPS3AP61247 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.12□□□□□ -1.75
RPS3AP61247 snoU109.4-201ENST00000458953 143 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 AC079804.1-201ENST00000461922 436 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RPS3AP61247 AC004263.1-201ENST00000479327 332 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 MTCYBP35-201ENST00000503630 1137 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.12□□□□□ -1.75
RPS3AP61247 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPS3AP61247 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.12□□□□□ -1.75
RPS3AP61247 AC093281.2-201ENST00000510153 597 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.12□□□□□ -1.75
RPS3AP61247 AC026407.1-201ENST00000518369 204 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.12□□□□□ -1.75
RPS3AP61247 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.12□□□□□ -1.75
RPS3AP61247 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.12□□□□□ -1.75
RPS3AP61247 AP001781.1-201ENST00000530977 207 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.12□□□□□ -1.75
RPS3AP61247 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.12□□□□□ -1.75
RPS3AP61247 AC091515.1-201ENST00000548110 679 ntBASIC4.12□□□□□ -1.75
RPS3AP61247 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms