Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ACTBP60709 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.95□□□□□ -1.94
ACTBP60709 NPM1P13-201ENST00000452663 865 ntBASIC2.95□□□□□ -1.94
ACTBP60709 AC091564.1-201ENST00000464563 479 ntBASIC2.95□□□□□ -1.94
ACTBP60709 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.95□□□□□ -1.94
ACTBP60709 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.95□□□□□ -1.94
ACTBP60709 AC091959.2-201ENST00000477363 321 ntBASIC2.95□□□□□ -1.94
ACTBP60709 HMGN1P11-201ENST00000508668 303 ntBASIC2.95□□□□□ -1.94
ACTBP60709 RNA5SP380-201ENST00000517190 98 ntBASIC2.95□□□□□ -1.94
ACTBP60709 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.95□□□□□ -1.94
ACTBP60709 HMGB1P23-201ENST00000518743 568 ntBASIC2.95□□□□□ -1.94
ACTBP60709 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ACTBP60709 AC104997.1-201ENST00000519761 717 ntBASIC2.95□□□□□ -1.94
ACTBP60709 AC245166.1-201ENST00000521012 253 ntBASIC2.95□□□□□ -1.94
ACTBP60709 AC008676.3-201ENST00000521237 435 ntBASIC2.95□□□□□ -1.94
ACTBP60709 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ACTBP60709 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.95□□□□□ -1.94
ACTBP60709 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.95□□□□□ -1.94
ACTBP60709 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.95□□□□□ -1.94
ACTBP60709 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.95□□□□□ -1.94
ACTBP60709 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.95□□□□□ -1.94
ACTBP60709 AC106785.1-201ENST00000565935 262 ntBASIC2.95□□□□□ -1.94
ACTBP60709 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.95□□□□□ -1.94
ACTBP60709 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.95□□□□□ -1.94
ACTBP60709 AC093227.2-201ENST00000589357 285 ntBASIC2.95□□□□□ -1.94
ACTBP60709 RNU1-30P-201ENST00000606575 163 ntBASIC2.95□□□□□ -1.94
ACTBP60709 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.95□□□□□ -1.94
ACTBP60709 AC068831.7-201ENST00000616954 363 ntBASIC2.95□□□□□ -1.94
ACTBP60709 RNU6-156P-201ENST00000621869 107 ntBASIC2.95□□□□□ -1.94
ACTBP60709 AL161637.1-201ENST00000622380 412 ntBASIC2.95□□□□□ -1.94
ACTBP60709 ELL2P4-201ENST00000446870 1376 ntBASIC2.95□□□□□ -1.94
ACTBP60709 ZNF37BP-203ENST00000452306 1352 ntBASIC2.95□□□□□ -1.94
ACTBP60709 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.95□□□□□ -1.94
ACTBP60709 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ACTBP60709 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ACTBP60709 AC032011.1-201ENST00000611703 1549 ntBASIC2.94□□□□□ -1.94
ACTBP60709 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
ACTBP60709 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ACTBP60709 MIR554-201ENST00000384874 96 ntBASIC2.94□□□□□ -1.94
ACTBP60709 AC109780.2-201ENST00000413467 845 ntBASIC2.94□□□□□ -1.94
ACTBP60709 MTCO3P4-201ENST00000419236 787 ntBASIC2.94□□□□□ -1.94
ACTBP60709 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.94□□□□□ -1.94
ACTBP60709 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.94□□□□□ -1.94
ACTBP60709 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.94□□□□□ -1.94
ACTBP60709 SNRPEP4-201ENST00000435815 279 ntBASIC2.94□□□□□ -1.94
ACTBP60709 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.94□□□□□ -1.94
ACTBP60709 Z99714.1-201ENST00000450463 807 ntBASIC2.94□□□□□ -1.94
ACTBP60709 RPS24P6-201ENST00000452670 400 ntBASIC2.94□□□□□ -1.94
ACTBP60709 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.94□□□□□ -1.94
ACTBP60709 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ACTBP60709 FABP5P6-201ENST00000510588 409 ntBASIC2.94□□□□□ -1.94
ACTBP60709 SNORA31.26-201ENST00000517250 137 ntBASIC2.94□□□□□ -1.94
ACTBP60709 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.94□□□□□ -1.94
ACTBP60709 RANP9-201ENST00000519957 271 ntBASIC2.94□□□□□ -1.94
ACTBP60709 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.94□□□□□ -1.94
ACTBP60709 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.94□□□□□ -1.94
ACTBP60709 SNORD84-203ENST00000584275 78 ntBASIC2.94□□□□□ -1.94
ACTBP60709 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.94□□□□□ -1.94
ACTBP60709 AC078899.3-201ENST00000599065 212 ntBASIC2.94□□□□□ -1.94
ACTBP60709 BDH2P1-201ENST00000602288 736 ntBASIC2.94□□□□□ -1.94
ACTBP60709 AC007566.2-201ENST00000603642 413 ntBASIC2.94□□□□□ -1.94
ACTBP60709 AC092354.2-201ENST00000607786 514 ntBASIC2.94□□□□□ -1.94
ACTBP60709 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.94□□□□□ -1.94
ACTBP60709 AL365440.1-201ENST00000436135 2167 ntBASIC2.94□□□□□ -1.94
ACTBP60709 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.93□□□□□ -1.94
ACTBP60709 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
ACTBP60709 AC004972.1-201ENST00000623934 2209 ntBASIC2.93□□□□□ -1.94
ACTBP60709 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.93□□□□□ -1.94
ACTBP60709 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
ACTBP60709 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ACTBP60709 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ACTBP60709 MIR421-201ENST00000365696 85 ntBASIC2.93□□□□□ -1.94
ACTBP60709 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ACTBP60709 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.93□□□□□ -1.94
ACTBP60709 RNU6-837P-201ENST00000391056 108 ntBASIC2.93□□□□□ -1.94
ACTBP60709 RPL7P60-201ENST00000397636 735 ntBASIC2.93□□□□□ -1.94
ACTBP60709 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.93□□□□□ -1.94
ACTBP60709 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
ACTBP60709 RN7SKP27-201ENST00000410684 333 ntBASIC2.93□□□□□ -1.94
ACTBP60709 RPL32P35-201ENST00000415214 394 ntBASIC2.93□□□□□ -1.94
ACTBP60709 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.93□□□□□ -1.94
ACTBP60709 NDUFB4P5-201ENST00000415445 361 ntBASIC2.93□□□□□ -1.94
ACTBP60709 TOMM22P1-201ENST00000418578 312 ntBASIC2.93□□□□□ -1.94
ACTBP60709 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.93□□□□□ -1.94
ACTBP60709 AC006960.1-201ENST00000419980 153 ntBASIC2.93□□□□□ -1.94
ACTBP60709 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.93□□□□□ -1.94
ACTBP60709 HMGB3P11-201ENST00000440127 604 ntBASIC2.93□□□□□ -1.94
ACTBP60709 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.93□□□□□ -1.94
ACTBP60709 HMGB1P5-202ENST00000451497 985 ntBASIC2.93□□□□□ -1.94
ACTBP60709 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.93□□□□□ -1.94
ACTBP60709 RNA5SP217-201ENST00000515959 91 ntBASIC2.93□□□□□ -1.94
ACTBP60709 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.93□□□□□ -1.94
ACTBP60709 AC019227.1-201ENST00000526902 510 ntBASIC2.93□□□□□ -1.94
ACTBP60709 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.93□□□□□ -1.94
ACTBP60709 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.93□□□□□ -1.94
ACTBP60709 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.93□□□□□ -1.94
ACTBP60709 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.93□□□□□ -1.94
ACTBP60709 MIR1254-2-201ENST00000579553 63 ntBASIC2.93□□□□□ -1.94
ACTBP60709 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.93□□□□□ -1.94
ACTBP60709 AL109618.2-201ENST00000605527 211 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms