Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 TPT1P2-201ENST00000413105 503 ntBASIC5□□□□□ -1.61
RHBDL3P58872 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5□□□□□ -1.61
RHBDL3P58872 RPS24P7-201ENST00000416921 246 ntBASIC5□□□□□ -1.61
RHBDL3P58872 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5□□□□□ -1.61
RHBDL3P58872 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5□□□□□ -1.61
RHBDL3P58872 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5□□□□□ -1.61
RHBDL3P58872 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5□□□□□ -1.61
RHBDL3P58872 ABCF2P2-201ENST00000450549 296 ntBASIC5□□□□□ -1.61
RHBDL3P58872 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5□□□□□ -1.61
RHBDL3P58872 SUMO2P2-201ENST00000456482 255 ntBASIC5□□□□□ -1.61
RHBDL3P58872 RPL7P18-201ENST00000478965 734 ntBASIC5□□□□□ -1.61
RHBDL3P58872 RPS29P19-201ENST00000479709 171 ntBASIC5□□□□□ -1.61
RHBDL3P58872 AC092045.1-201ENST00000495716 1231 ntBASIC5□□□□□ -1.61
RHBDL3P58872 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5□□□□□ -1.61
RHBDL3P58872 BNIP3P41-201ENST00000503774 571 ntBASIC5□□□□□ -1.61
RHBDL3P58872 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5□□□□□ -1.61
RHBDL3P58872 RNU5A-4P-201ENST00000516588 111 ntBASIC5□□□□□ -1.61
RHBDL3P58872 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5□□□□□ -1.61
RHBDL3P58872 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5□□□□□ -1.61
RHBDL3P58872 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5□□□□□ -1.61
RHBDL3P58872 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5□□□□□ -1.61
RHBDL3P58872 AC006270.2-201ENST00000578523 652 ntBASIC5□□□□□ -1.61
RHBDL3P58872 AC097505.1-201ENST00000610199 565 ntBASIC5□□□□□ -1.61
RHBDL3P58872 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5□□□□□ -1.61
RHBDL3P58872 AC022106.2-201ENST00000620114 757 ntBASIC5□□□□□ -1.61
RHBDL3P58872 AC019278.1-201ENST00000623516 479 ntBASIC5□□□□□ -1.61
RHBDL3P58872 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDL3P58872 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDL3P58872 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5□□□□□ -1.61
RHBDL3P58872 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDL3P58872 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
RHBDL3P58872 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDL3P58872 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RHBDL3P58872 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDL3P58872 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5□□□□□ -1.61
RHBDL3P58872 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
RHBDL3P58872 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.99□□□□□ -1.61
RHBDL3P58872 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDL3P58872 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RHBDL3P58872 OR11H4-201ENST00000315409 1082 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 RNU6-989P-201ENST00000362756 107 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 Y_RNA.408-201ENST00000383987 102 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 MIR1284-201ENST00000408337 120 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 RNU6-628P-201ENST00000410675 107 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDL3P58872 AC108032.1-201ENST00000416706 207 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDL3P58872 GLRXP1-201ENST00000423261 334 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDL3P58872 RPL23AP65-201ENST00000475608 468 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 FAM172BP-201ENST00000487497 1089 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 AC090453.1-201ENST00000495560 436 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDL3P58872 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDL3P58872 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDL3P58872 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDL3P58872 AC104986.1-201ENST00000517978 436 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDL3P58872 OR5AK1P-201ENST00000524837 922 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 AP004371.1-201ENST00000525240 214 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDL3P58872 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.99□□□□□ -1.61
RHBDL3P58872 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDL3P58872 EEF1B2P4-201ENST00000551398 348 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDL3P58872 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDL3P58872 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDL3P58872 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDL3P58872 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDL3P58872 AL139286.1-201ENST00000604465 483 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 AC025588.2-201ENST00000604851 466 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDL3P58872 AC245297.2-201ENST00000610119 565 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 MIR6875-201ENST00000617506 72 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RHBDL3P58872 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RHBDL3P58872 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDL3P58872 ZNF876P-202ENST00000398732 1485 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.99□□□□□ -1.61
RHBDL3P58872 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RHBDL3P58872 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDL3P58872 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDL3P58872 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDL3P58872 AP000776.1-201ENST00000530032 1663 ntBASIC4.99□□□□□ -1.61
RHBDL3P58872 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.99□□□□□ -1.61
RHBDL3P58872 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDL3P58872 MAPK10-303ENST00000641324 3959 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDL3P58872 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDL3P58872 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDL3P58872 LINC01355-201ENST00000566551 5444 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDL3P58872 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.98□□□□□ -1.61
RHBDL3P58872 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RHBDL3P58872 RNA5SP513-201ENST00000364648 118 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 RNA5SP22-201ENST00000365393 109 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 RNU6-1181P-201ENST00000384191 106 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RHBDL3P58872 MIR1271-201ENST00000408537 86 ntBASIC4.98□□□□□ -1.61
RHBDL3P58872 MTCO3P12-201ENST00000416718 547 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms