Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 BTBD7P2-201ENST00000441962 620 ntBASIC3.26□□□□□ -1.89
VSX2P58304 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VSX2P58304 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.26□□□□□ -1.89
VSX2P58304 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.26□□□□□ -1.89
VSX2P58304 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.26□□□□□ -1.89
VSX2P58304 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.26□□□□□ -1.89
VSX2P58304 AC008155.2-201ENST00000464337 397 ntBASIC3.26□□□□□ -1.89
VSX2P58304 TRBV8-2-201ENST00000475637 270 ntBASIC3.26□□□□□ -1.89
VSX2P58304 AC073522.1-201ENST00000483312 377 ntBASIC3.26□□□□□ -1.89
VSX2P58304 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VSX2P58304 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.26□□□□□ -1.89
VSX2P58304 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VSX2P58304 AC074250.1-201ENST00000511117 192 ntBASIC3.26□□□□□ -1.89
VSX2P58304 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.26□□□□□ -1.89
VSX2P58304 SNORA70.19-201ENST00000516717 90 ntBASIC3.26□□□□□ -1.89
VSX2P58304 RN7SKP283-201ENST00000517197 270 ntBASIC3.26□□□□□ -1.89
VSX2P58304 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.26□□□□□ -1.89
VSX2P58304 OR4R3P-201ENST00000525084 838 ntBASIC3.26□□□□□ -1.89
VSX2P58304 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.26□□□□□ -1.89
VSX2P58304 AL139174.1-201ENST00000531489 886 ntBASIC3.26□□□□□ -1.89
VSX2P58304 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.26□□□□□ -1.89
VSX2P58304 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.26□□□□□ -1.89
VSX2P58304 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VSX2P58304 AC067852.3-201ENST00000589177 561 ntBASIC3.26□□□□□ -1.89
VSX2P58304 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.26□□□□□ -1.89
VSX2P58304 AL161756.2-201ENST00000604597 246 ntBASIC3.26□□□□□ -1.89
VSX2P58304 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.26□□□□□ -1.89
VSX2P58304 AL354696.1-201ENST00000614652 497 ntBASIC3.26□□□□□ -1.89
VSX2P58304 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.26□□□□□ -1.89
VSX2P58304 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.26□□□□□ -1.89
VSX2P58304 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.26□□□□□ -1.89
VSX2P58304 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VSX2P58304 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VSX2P58304 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VSX2P58304 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
VSX2P58304 AL049737.1-201ENST00000413920 1403 ntBASIC3.26□□□□□ -1.89
VSX2P58304 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
VSX2P58304 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VSX2P58304 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VSX2P58304 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
VSX2P58304 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.25□□□□□ -1.89
VSX2P58304 RAD1P1-201ENST00000231383 813 ntBASIC3.25□□□□□ -1.89
VSX2P58304 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VSX2P58304 RNU6-1293P-201ENST00000384077 107 ntBASIC3.25□□□□□ -1.89
VSX2P58304 RNVU1-14-201ENST00000384770 164 ntBASIC3.25□□□□□ -1.89
VSX2P58304 ATF1P1-201ENST00000406040 927 ntBASIC3.25□□□□□ -1.89
VSX2P58304 OSTCP5-201ENST00000425293 453 ntBASIC3.25□□□□□ -1.89
VSX2P58304 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.25□□□□□ -1.89
VSX2P58304 AC005019.1-201ENST00000436455 431 ntBASIC3.25□□□□□ -1.89
VSX2P58304 SETP5-201ENST00000437270 562 ntBASIC3.25□□□□□ -1.89
VSX2P58304 RPS3AP12-201ENST00000443616 753 ntBASIC3.25□□□□□ -1.89
VSX2P58304 RPL23AP23-201ENST00000452590 471 ntBASIC3.25□□□□□ -1.89
VSX2P58304 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.25□□□□□ -1.89
VSX2P58304 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.25□□□□□ -1.89
VSX2P58304 AC089999.1-201ENST00000460336 374 ntBASIC3.25□□□□□ -1.89
VSX2P58304 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.25□□□□□ -1.89
VSX2P58304 AC093663.1-201ENST00000497190 394 ntBASIC3.25□□□□□ -1.89
VSX2P58304 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.25□□□□□ -1.89
VSX2P58304 AC133963.2-201ENST00000513686 578 ntBASIC3.25□□□□□ -1.89
VSX2P58304 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.25□□□□□ -1.89
VSX2P58304 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.25□□□□□ -1.89
VSX2P58304 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.25□□□□□ -1.89
VSX2P58304 AC093331.1-201ENST00000521474 169 ntBASIC3.25□□□□□ -1.89
VSX2P58304 COX6B1P6-201ENST00000522347 255 ntBASIC3.25□□□□□ -1.89
VSX2P58304 AP004242.1-201ENST00000533701 349 ntBASIC3.25□□□□□ -1.89
VSX2P58304 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.25□□□□□ -1.89
VSX2P58304 AC011602.1-201ENST00000546484 331 ntBASIC3.25□□□□□ -1.89
VSX2P58304 AC017100.2-201ENST00000584628 355 ntBASIC3.25□□□□□ -1.89
VSX2P58304 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.25□□□□□ -1.89
VSX2P58304 AC012467.1-201ENST00000607740 256 ntBASIC3.25□□□□□ -1.89
VSX2P58304 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.25□□□□□ -1.89
VSX2P58304 RNU6-156P-201ENST00000621869 107 ntBASIC3.25□□□□□ -1.89
VSX2P58304 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.25□□□□□ -1.89
VSX2P58304 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.25□□□□□ -1.89
VSX2P58304 AL049781.1-201ENST00000623195 3585 ntBASIC3.25□□□□□ -1.89
VSX2P58304 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VSX2P58304 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VSX2P58304 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VSX2P58304 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
VSX2P58304 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VSX2P58304 AC104446.1-201ENST00000613728 1321 ntBASIC3.24□□□□□ -1.89
VSX2P58304 AL513302.2-201ENST00000562313 1842 ntBASIC3.24□□□□□ -1.89
VSX2P58304 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.24□□□□□ -1.89
VSX2P58304 AC005183.1-201ENST00000603687 1979 ntBASIC3.24□□□□□ -1.89
VSX2P58304 AL589826.1-201ENST00000340697 249 ntBASIC3.24□□□□□ -1.89
VSX2P58304 HMGB1P10-201ENST00000395823 563 ntBASIC3.24□□□□□ -1.89
VSX2P58304 Z99755.1-201ENST00000414048 380 ntBASIC3.24□□□□□ -1.89
VSX2P58304 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.24□□□□□ -1.89
VSX2P58304 RPF2P1-201ENST00000424137 906 ntBASIC3.24□□□□□ -1.89
VSX2P58304 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.24□□□□□ -1.89
VSX2P58304 AL158071.1-201ENST00000430315 461 ntBASIC3.24□□□□□ -1.89
VSX2P58304 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.24□□□□□ -1.89
VSX2P58304 AC005189.1-201ENST00000431286 310 ntBASIC3.24□□□□□ -1.89
VSX2P58304 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.24□□□□□ -1.89
VSX2P58304 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.24□□□□□ -1.89
VSX2P58304 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.24□□□□□ -1.89
VSX2P58304 AC104978.1-201ENST00000449387 391 ntBASIC3.24□□□□□ -1.89
VSX2P58304 RPL12P26-201ENST00000452430 487 ntBASIC3.24□□□□□ -1.89
VSX2P58304 AC097262.1-201ENST00000452559 548 ntBASIC3.24□□□□□ -1.89
VSX2P58304 MRPL35P4-201ENST00000453682 566 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms