Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC104619.4-201ENST00000510773 249 ntBASIC3.38□□□□□ -1.87
LIM2P55344 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.38□□□□□ -1.87
LIM2P55344 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.38□□□□□ -1.87
LIM2P55344 SNORA70.18-201ENST00000516696 98 ntBASIC3.38□□□□□ -1.87
LIM2P55344 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.38□□□□□ -1.87
LIM2P55344 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.38□□□□□ -1.87
LIM2P55344 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.38□□□□□ -1.87
LIM2P55344 OR4C2P-201ENST00000530855 1064 ntBASIC3.38□□□□□ -1.87
LIM2P55344 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.38□□□□□ -1.87
LIM2P55344 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.38□□□□□ -1.87
LIM2P55344 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.38□□□□□ -1.87
LIM2P55344 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.38□□□□□ -1.87
LIM2P55344 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.38□□□□□ -1.87
LIM2P55344 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LIM2P55344 NIFKP8-201ENST00000560500 874 ntBASIC3.38□□□□□ -1.87
LIM2P55344 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.38□□□□□ -1.87
LIM2P55344 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
LIM2P55344 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.38□□□□□ -1.87
LIM2P55344 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.38□□□□□ -1.87
LIM2P55344 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LIM2P55344 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LIM2P55344 LLPHP1-201ENST00000603571 367 ntBASIC3.38□□□□□ -1.87
LIM2P55344 RPAP2P1-201ENST00000603626 1168 ntBASIC3.38□□□□□ -1.87
LIM2P55344 AC018754.1-201ENST00000607486 925 ntBASIC3.38□□□□□ -1.87
LIM2P55344 AL512427.1-201ENST00000618593 349 ntBASIC3.38□□□□□ -1.87
LIM2P55344 VN1R7P-201ENST00000619242 903 ntBASIC3.38□□□□□ -1.87
LIM2P55344 AC034229.5-201ENST00000624258 185 ntBASIC3.38□□□□□ -1.87
LIM2P55344 AC103798.2-201ENST00000624292 632 ntBASIC3.38□□□□□ -1.87
LIM2P55344 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.38□□□□□ -1.87
LIM2P55344 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LIM2P55344 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LIM2P55344 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.37□□□□□ -1.87
LIM2P55344 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LIM2P55344 AC016716.1-201ENST00000265882 708 ntBASIC3.37□□□□□ -1.87
LIM2P55344 ANKRD36P1-201ENST00000344424 659 ntBASIC3.37□□□□□ -1.87
LIM2P55344 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.37□□□□□ -1.87
LIM2P55344 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LIM2P55344 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LIM2P55344 AL136116.1-201ENST00000403591 381 ntBASIC3.37□□□□□ -1.87
LIM2P55344 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LIM2P55344 U3.39-201ENST00000408569 239 ntBASIC3.37□□□□□ -1.87
LIM2P55344 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.37□□□□□ -1.87
LIM2P55344 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.37□□□□□ -1.87
LIM2P55344 AC027644.1-201ENST00000419595 298 ntBASIC3.37□□□□□ -1.87
LIM2P55344 USP9YP21-201ENST00000420603 432 ntBASIC3.37□□□□□ -1.87
LIM2P55344 AC092634.2-201ENST00000428146 1010 ntBASIC3.37□□□□□ -1.87
LIM2P55344 AC011242.1-201ENST00000433596 1158 ntBASIC3.37□□□□□ -1.87
LIM2P55344 RAB11AP1-201ENST00000442978 646 ntBASIC3.37□□□□□ -1.87
LIM2P55344 RPS15AP1-201ENST00000457423 391 ntBASIC3.37□□□□□ -1.87
LIM2P55344 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.37□□□□□ -1.87
LIM2P55344 HMGB1P38-201ENST00000490557 577 ntBASIC3.37□□□□□ -1.87
LIM2P55344 AC005726.1-201ENST00000494679 427 ntBASIC3.37□□□□□ -1.87
LIM2P55344 FCF1P3-201ENST00000496394 590 ntBASIC3.37□□□□□ -1.87
LIM2P55344 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.37□□□□□ -1.87
LIM2P55344 AC069306.1-201ENST00000507006 843 ntBASIC3.37□□□□□ -1.87
LIM2P55344 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.37□□□□□ -1.87
LIM2P55344 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.37□□□□□ -1.87
LIM2P55344 AC010376.1-201ENST00000522101 334 ntBASIC3.37□□□□□ -1.87
LIM2P55344 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.37□□□□□ -1.87
LIM2P55344 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.37□□□□□ -1.87
LIM2P55344 AC104417.1-201ENST00000523974 751 ntBASIC3.37□□□□□ -1.87
LIM2P55344 AP000926.4-201ENST00000527351 454 ntBASIC3.37□□□□□ -1.87
LIM2P55344 OR8I1P-201ENST00000529291 931 ntBASIC3.37□□□□□ -1.87
LIM2P55344 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.37□□□□□ -1.87
LIM2P55344 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.37□□□□□ -1.87
LIM2P55344 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.37□□□□□ -1.87
LIM2P55344 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.37□□□□□ -1.87
LIM2P55344 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.37□□□□□ -1.87
LIM2P55344 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LIM2P55344 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.37□□□□□ -1.87
LIM2P55344 AC083899.3-201ENST00000603413 594 ntBASIC3.37□□□□□ -1.87
LIM2P55344 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.37□□□□□ -1.87
LIM2P55344 RNVU1-4-201ENST00000612985 164 ntBASIC3.37□□□□□ -1.87
LIM2P55344 U7.8-201ENST00000619968 63 ntBASIC3.37□□□□□ -1.87
LIM2P55344 AP003355.3-201ENST00000623465 114 ntBASIC3.37□□□□□ -1.87
LIM2P55344 AP003485.1-201ENST00000625093 753 ntBASIC3.37□□□□□ -1.87
LIM2P55344 AL034408.1-202ENST00000636088 415 ntBASIC3.37□□□□□ -1.87
LIM2P55344 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.37□□□□□ -1.87
LIM2P55344 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LIM2P55344 MTCO1P24-201ENST00000515438 1558 ntBASIC3.37□□□□□ -1.87
LIM2P55344 PNPT1P2-201ENST00000456768 2050 ntBASIC3.37□□□□□ -1.87
LIM2P55344 MTND5P31-201ENST00000419366 1374 ntBASIC3.37□□□□□ -1.87
LIM2P55344 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LIM2P55344 NMD3P1-201ENST00000439704 1488 ntBASIC3.36□□□□□ -1.87
LIM2P55344 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LIM2P55344 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LIM2P55344 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LIM2P55344 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
LIM2P55344 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
LIM2P55344 RNU6-1243P-201ENST00000364028 107 ntBASIC3.36□□□□□ -1.87
LIM2P55344 SNORA73.2-201ENST00000364946 201 ntBASIC3.36□□□□□ -1.87
LIM2P55344 SNORA62.3-201ENST00000365110 153 ntBASIC3.36□□□□□ -1.87
LIM2P55344 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LIM2P55344 RNU6-356P-201ENST00000384140 107 ntBASIC3.36□□□□□ -1.87
LIM2P55344 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LIM2P55344 PTMAP2-201ENST00000397627 327 ntBASIC3.36□□□□□ -1.87
LIM2P55344 AL121978.1-201ENST00000402778 359 ntBASIC3.36□□□□□ -1.87
LIM2P55344 AC096533.1-201ENST00000411645 353 ntBASIC3.36□□□□□ -1.87
LIM2P55344 VN1R51P-201ENST00000411675 945 ntBASIC3.36□□□□□ -1.87
LIM2P55344 RPS7P9-201ENST00000414704 586 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms