Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.7□□□□□ -1.66
COPAP53621 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
COPAP53621 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.7□□□□□ -1.66
COPAP53621 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
COPAP53621 PARP1P2-201ENST00000556806 195 ntBASIC4.7□□□□□ -1.66
COPAP53621 CYCSP2-201ENST00000558168 301 ntBASIC4.7□□□□□ -1.66
COPAP53621 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.7□□□□□ -1.66
COPAP53621 AC020914.6-201ENST00000594327 272 ntBASIC4.7□□□□□ -1.66
COPAP53621 WISP1-OT1-201ENST00000602893 642 ntBASIC4.7□□□□□ -1.66
COPAP53621 LLPHP1-201ENST00000603571 367 ntBASIC4.7□□□□□ -1.66
COPAP53621 AL596327.1-201ENST00000603629 213 ntBASIC4.7□□□□□ -1.66
COPAP53621 BNIP3P11-201ENST00000603878 563 ntBASIC4.7□□□□□ -1.66
COPAP53621 AL158063.1-201ENST00000615349 536 ntBASIC4.7□□□□□ -1.66
COPAP53621 MLECP1-201ENST00000615893 709 ntBASIC4.7□□□□□ -1.66
COPAP53621 AC006338.2-201ENST00000616864 791 ntBASIC4.7□□□□□ -1.66
COPAP53621 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.7□□□□□ -1.66
COPAP53621 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
COPAP53621 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COPAP53621 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
COPAP53621 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COPAP53621 ERCC6-202ENST00000374127 1782 ntBASIC4.7□□□□□ -1.66
COPAP53621 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
COPAP53621 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.7□□□□□ -1.66
COPAP53621 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COPAP53621 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
COPAP53621 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
COPAP53621 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COPAP53621 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COPAP53621 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COPAP53621 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
COPAP53621 AC021146.4-201ENST00000309229 279 ntBASIC4.69□□□□□ -1.66
COPAP53621 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COPAP53621 RPL21P132-201ENST00000331267 462 ntBASIC4.69□□□□□ -1.66
COPAP53621 RNU6-500P-201ENST00000362349 107 ntBASIC4.69□□□□□ -1.66
COPAP53621 RNA5SP502-201ENST00000362694 119 ntBASIC4.69□□□□□ -1.66
COPAP53621 SNORA71.2-201ENST00000364941 134 ntBASIC4.69□□□□□ -1.66
COPAP53621 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COPAP53621 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COPAP53621 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COPAP53621 AL049693.1-201ENST00000402760 611 ntBASIC4.69□□□□□ -1.66
COPAP53621 AL355379.1-201ENST00000405542 640 ntBASIC4.69□□□□□ -1.66
COPAP53621 RPL23AP48-201ENST00000406913 488 ntBASIC4.69□□□□□ -1.66
COPAP53621 RN7SKP177-201ENST00000410567 355 ntBASIC4.69□□□□□ -1.66
COPAP53621 HSFY4P-201ENST00000415994 1181 ntBASIC4.69□□□□□ -1.66
COPAP53621 PDSS1P1-201ENST00000422953 1114 ntBASIC4.69□□□□□ -1.66
COPAP53621 AL953862.1-201ENST00000423016 168 ntBASIC4.69□□□□□ -1.66
COPAP53621 RPL7P57-201ENST00000423238 740 ntBASIC4.69□□□□□ -1.66
COPAP53621 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.69□□□□□ -1.66
COPAP53621 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.69□□□□□ -1.66
COPAP53621 AC010153.1-201ENST00000432862 727 ntBASIC4.69□□□□□ -1.66
COPAP53621 MTND1P30-201ENST00000441241 901 ntBASIC4.69□□□□□ -1.66
COPAP53621 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.69□□□□□ -1.66
COPAP53621 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.69□□□□□ -1.66
COPAP53621 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.69□□□□□ -1.66
COPAP53621 ARPC3P2-201ENST00000457786 533 ntBASIC4.69□□□□□ -1.66
COPAP53621 AC090142.1-201ENST00000465776 462 ntBASIC4.69□□□□□ -1.66
COPAP53621 AC103987.1-201ENST00000473394 348 ntBASIC4.69□□□□□ -1.66
COPAP53621 AC068587.1-201ENST00000483613 781 ntBASIC4.69□□□□□ -1.66
COPAP53621 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.69□□□□□ -1.66
COPAP53621 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.69□□□□□ -1.66
COPAP53621 AC106038.2-201ENST00000520706 568 ntBASIC4.69□□□□□ -1.66
COPAP53621 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.69□□□□□ -1.66
COPAP53621 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.69□□□□□ -1.66
COPAP53621 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COPAP53621 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.69□□□□□ -1.66
COPAP53621 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.69□□□□□ -1.66
COPAP53621 AC068790.2-201ENST00000602601 557 ntBASIC4.69□□□□□ -1.66
COPAP53621 AC024560.3-201ENST00000608482 349 ntBASIC4.69□□□□□ -1.66
COPAP53621 AC078899.5-201ENST00000612475 178 ntBASIC4.69□□□□□ -1.66
COPAP53621 OR52H1-202ENST00000641796 1061 ntBASIC4.69□□□□□ -1.66
COPAP53621 AC099063.3-201ENST00000642066 185 ntBASIC4.69□□□□□ -1.66
COPAP53621 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.69□□□□□ -1.66
COPAP53621 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COPAP53621 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
COPAP53621 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.69□□□□□ -1.66
COPAP53621 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
COPAP53621 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
COPAP53621 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COPAP53621 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.69□□□□□ -1.66
COPAP53621 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.68□□□□□ -1.66
COPAP53621 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
COPAP53621 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.68□□□□□ -1.66
COPAP53621 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.68□□□□□ -1.66
COPAP53621 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
COPAP53621 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.68□□□□□ -1.66
COPAP53621 AC125257.1-201ENST00000560400 2930 ntBASIC4.68□□□□□ -1.66
COPAP53621 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
COPAP53621 Y_RNA.302-201ENST00000364997 102 ntBASIC4.68□□□□□ -1.66
COPAP53621 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
COPAP53621 MIR659-201ENST00000384963 97 ntBASIC4.68□□□□□ -1.66
COPAP53621 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
COPAP53621 MIR921-201ENST00000401133 56 ntBASIC4.68□□□□□ -1.66
COPAP53621 AL603766.1-201ENST00000407763 664 ntBASIC4.68□□□□□ -1.66
COPAP53621 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.68□□□□□ -1.66
COPAP53621 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.68□□□□□ -1.66
COPAP53621 NPM1P11-201ENST00000417106 855 ntBASIC4.68□□□□□ -1.66
COPAP53621 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.68□□□□□ -1.66
COPAP53621 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COPAP53621 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.68□□□□□ -1.66
COPAP53621 PPIAP3-201ENST00000450588 505 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms