Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC107982.1-201ENST00000507171 1300 ntBASIC4.65□□□□□ -1.67
COPB1P53618 MTND5P24-201ENST00000438892 1767 ntBASIC4.65□□□□□ -1.67
COPB1P53618 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
COPB1P53618 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
COPB1P53618 MTND5P29-201ENST00000458676 1807 ntBASIC4.65□□□□□ -1.67
COPB1P53618 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COPB1P53618 AL356473.1-201ENST00000406203 1408 ntBASIC4.64□□□□□ -1.67
COPB1P53618 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COPB1P53618 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COPB1P53618 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
COPB1P53618 RPL32P3-201ENST00000359025 275 ntBASIC4.64□□□□□ -1.67
COPB1P53618 RNU6-492P-201ENST00000363035 104 ntBASIC4.64□□□□□ -1.67
COPB1P53618 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COPB1P53618 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COPB1P53618 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COPB1P53618 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COPB1P53618 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COPB1P53618 RNU2-65P-201ENST00000410162 185 ntBASIC4.64□□□□□ -1.67
COPB1P53618 RNU6-272P-201ENST00000411028 104 ntBASIC4.64□□□□□ -1.67
COPB1P53618 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.64□□□□□ -1.67
COPB1P53618 AC069213.2-201ENST00000420238 366 ntBASIC4.64□□□□□ -1.67
COPB1P53618 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COPB1P53618 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.64□□□□□ -1.67
COPB1P53618 NANOGP6-201ENST00000429190 847 ntBASIC4.64□□□□□ -1.67
COPB1P53618 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.64□□□□□ -1.67
COPB1P53618 TRIM60P18-201ENST00000441518 828 ntBASIC4.64□□□□□ -1.67
COPB1P53618 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.64□□□□□ -1.67
COPB1P53618 OR6C5P-201ENST00000452388 923 ntBASIC4.64□□□□□ -1.67
COPB1P53618 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.64□□□□□ -1.67
COPB1P53618 AC072039.1-201ENST00000477611 581 ntBASIC4.64□□□□□ -1.67
COPB1P53618 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.64□□□□□ -1.67
COPB1P53618 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COPB1P53618 AC004069.2-201ENST00000505438 1114 ntBASIC4.64□□□□□ -1.67
COPB1P53618 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.64□□□□□ -1.67
COPB1P53618 RNU6-1261P-201ENST00000517194 104 ntBASIC4.64□□□□□ -1.67
COPB1P53618 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.64□□□□□ -1.67
COPB1P53618 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.64□□□□□ -1.67
COPB1P53618 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COPB1P53618 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.64□□□□□ -1.67
COPB1P53618 AP001207.1-201ENST00000524051 481 ntBASIC4.64□□□□□ -1.67
COPB1P53618 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.64□□□□□ -1.67
COPB1P53618 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.64□□□□□ -1.67
COPB1P53618 AC113403.1-201ENST00000604910 193 ntBASIC4.64□□□□□ -1.67
COPB1P53618 AC092354.2-201ENST00000607786 514 ntBASIC4.64□□□□□ -1.67
COPB1P53618 AL391497.1-201ENST00000608671 547 ntBASIC4.64□□□□□ -1.67
COPB1P53618 AC243654.2-201ENST00000612843 443 ntBASIC4.64□□□□□ -1.67
COPB1P53618 MIR7844-201ENST00000616161 122 ntBASIC4.64□□□□□ -1.67
COPB1P53618 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.64□□□□□ -1.67
COPB1P53618 MIR7702-201ENST00000621931 59 ntBASIC4.64□□□□□ -1.67
COPB1P53618 AC092192.1-201ENST00000633154 1018 ntBASIC4.64□□□□□ -1.67
COPB1P53618 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
COPB1P53618 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COPB1P53618 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.64□□□□□ -1.67
COPB1P53618 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.64□□□□□ -1.67
COPB1P53618 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.64□□□□□ -1.67
COPB1P53618 AC018529.3-201ENST00000624212 2254 ntBASIC4.63□□□□□ -1.67
COPB1P53618 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
COPB1P53618 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COPB1P53618 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COPB1P53618 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COPB1P53618 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COPB1P53618 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
COPB1P53618 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
COPB1P53618 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COPB1P53618 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COPB1P53618 AL121657.1-201ENST00000327215 531 ntBASIC4.63□□□□□ -1.67
COPB1P53618 SNORA70.2-201ENST00000364506 135 ntBASIC4.63□□□□□ -1.67
COPB1P53618 MIR1179-201ENST00000408703 91 ntBASIC4.63□□□□□ -1.67
COPB1P53618 RPS15AP38-201ENST00000413110 372 ntBASIC4.63□□□□□ -1.67
COPB1P53618 FCF1P2-201ENST00000415284 583 ntBASIC4.63□□□□□ -1.67
COPB1P53618 RPL23AP39-201ENST00000415533 405 ntBASIC4.63□□□□□ -1.67
COPB1P53618 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COPB1P53618 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.63□□□□□ -1.67
COPB1P53618 AC009237.2-201ENST00000421358 284 ntBASIC4.63□□□□□ -1.67
COPB1P53618 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COPB1P53618 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.63□□□□□ -1.67
COPB1P53618 RPL18P10-201ENST00000425606 538 ntBASIC4.63□□□□□ -1.67
COPB1P53618 AL157831.1-201ENST00000426134 473 ntBASIC4.63□□□□□ -1.67
COPB1P53618 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.63□□□□□ -1.67
COPB1P53618 MED14P1-201ENST00000430517 648 ntBASIC4.63□□□□□ -1.67
COPB1P53618 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.63□□□□□ -1.67
COPB1P53618 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
COPB1P53618 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.63□□□□□ -1.67
COPB1P53618 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COPB1P53618 AC004865.1-201ENST00000442276 1003 ntBASIC4.63□□□□□ -1.67
COPB1P53618 COX6CP2-201ENST00000444980 225 ntBASIC4.63□□□□□ -1.67
COPB1P53618 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.63□□□□□ -1.67
COPB1P53618 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.63□□□□□ -1.67
COPB1P53618 AC009963.2-201ENST00000453431 138 ntBASIC4.63□□□□□ -1.67
COPB1P53618 RAD23BP3-201ENST00000454157 1152 ntBASIC4.63□□□□□ -1.67
COPB1P53618 RPL23AP81-201ENST00000455252 467 ntBASIC4.63□□□□□ -1.67
COPB1P53618 NF1P3-201ENST00000457709 450 ntBASIC4.63□□□□□ -1.67
COPB1P53618 RN7SL809P-201ENST00000482040 297 ntBASIC4.63□□□□□ -1.67
COPB1P53618 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.63□□□□□ -1.67
COPB1P53618 SETP14-201ENST00000497538 873 ntBASIC4.63□□□□□ -1.67
COPB1P53618 AC111000.3-201ENST00000508057 576 ntBASIC4.63□□□□□ -1.67
COPB1P53618 CBX3P3-201ENST00000508108 532 ntBASIC4.63□□□□□ -1.67
COPB1P53618 PGBD4P4-201ENST00000509673 613 ntBASIC4.63□□□□□ -1.67
COPB1P53618 AC093281.2-201ENST00000510153 597 ntBASIC4.63□□□□□ -1.67
COPB1P53618 RNY4P37-201ENST00000516225 96 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms