Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SNORD97-201ENST00000459187 142 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 AC105758.1-201ENST00000506038 399 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 GAPDHP62-201ENST00000515313 990 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 AC097486.1-201ENST00000515331 210 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 RNA5SP318-201ENST00000516352 92 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 RNU6-1092P-201ENST00000516955 87 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 RNU6-64P-201ENST00000517119 105 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF144AP50876 RPA2P3-201ENST00000533268 770 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 AL133271.1-201ENST00000538229 291 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 AC091516.1-201ENST00000549191 703 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
RNF144AP50876 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF144AP50876 SUB1P3-201ENST00000564581 315 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF144AP50876 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.93□□□□□ -1.46
RNF144AP50876 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.93□□□□□ -1.46
RNF144AP50876 AC011500.1-201ENST00000601963 469 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 HMGB1P50-201ENST00000605814 607 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RNF144AP50876 AL355816.1-201ENST00000607951 118 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF144AP50876 AC009570.1-201ENST00000609599 745 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 AL590099.1-201ENST00000615276 138 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF144AP50876 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF144AP50876 AC110373.1-201ENST00000505994 3505 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 AC009313.2-201ENST00000417893 1941 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 PABPC1P7-201ENST00000413177 1513 ntBASIC5.93□□□□□ -1.46
RNF144AP50876 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF144AP50876 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
RNF144AP50876 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF144AP50876 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF144AP50876 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF144AP50876 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF144AP50876 AL731532.1-201ENST00000623972 4236 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF144AP50876 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF144AP50876 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF144AP50876 RBPJP6-201ENST00000411556 1431 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RNF144AP50876 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF144AP50876 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF144AP50876 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF144AP50876 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF144AP50876 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF144AP50876 AC103710.2-202ENST00000641454 2853 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF144AP50876 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF144AP50876 Y_RNA.26-201ENST00000362539 101 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 RNU6-1059P-201ENST00000363752 98 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 LCN1P2-201ENST00000372030 223 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 RNU6-190P-201ENST00000384154 102 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AC026310.1-201ENST00000396004 378 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF144AP50876 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF144AP50876 AL606753.1-201ENST00000427435 87 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AC093106.2-201ENST00000428212 385 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF144AP50876 AC097713.2-201ENST00000430199 356 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF144AP50876 AL353597.2-202ENST00000434901 373 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.92□□□□□ -1.46
RNF144AP50876 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.92□□□□□ -1.46
RNF144AP50876 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF144AP50876 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.92□□□□□ -1.46
RNF144AP50876 COL11A2P1-205ENST00000441798 676 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 RPS3AP12-201ENST00000443616 753 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF144AP50876 AC092967.1-201ENST00000449016 481 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF144AP50876 SETP20-201ENST00000457046 852 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF144AP50876 SNORD121B-201ENST00000458838 81 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 RNU7-167P-201ENST00000459160 62 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 RN7SL83P-201ENST00000468131 297 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 RN7SL413P-201ENST00000482700 297 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AC112484.3-201ENST00000505910 329 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AC026784.1-201ENST00000507986 352 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AC096745.1-201ENST00000509945 370 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.92□□□□□ -1.46
RNF144AP50876 SNORA40.14-201ENST00000516543 86 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.92□□□□□ -1.46
RNF144AP50876 AP005639.1-201ENST00000526939 192 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AC073916.1-201ENST00000545095 130 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AL121576.1-201ENST00000556055 276 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF144AP50876 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF144AP50876 HMGB2P1-201ENST00000591146 634 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AC104687.2-201ENST00000604442 342 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AL031176.1-201ENST00000604554 466 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AC008162.1-201ENST00000604718 254 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AC114477.1-201ENST00000605097 605 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AL670379.4-201ENST00000605279 254 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.92□□□□□ -1.46
RNF144AP50876 AC091925.2-201ENST00000625059 256 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 AL132640.3-201ENST00000630473 177 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 MIR4272-201ENST00000635924 64 ntBASIC5.92□□□□□ -1.46
RNF144AP50876 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF144AP50876 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms