Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.66□□□□□ -1.82
CASP4P49662 MRPL35P4-201ENST00000453682 566 ntBASIC3.66□□□□□ -1.82
CASP4P49662 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.66□□□□□ -1.82
CASP4P49662 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.66□□□□□ -1.82
CASP4P49662 AC078785.3-201ENST00000476607 425 ntBASIC3.66□□□□□ -1.82
CASP4P49662 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.66□□□□□ -1.82
CASP4P49662 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.66□□□□□ -1.82
CASP4P49662 AC008885.2-201ENST00000509506 930 ntBASIC3.66□□□□□ -1.82
CASP4P49662 FCF1P8-201ENST00000510322 597 ntBASIC3.66□□□□□ -1.82
CASP4P49662 RN7SKP60-201ENST00000516985 239 ntBASIC3.66□□□□□ -1.82
CASP4P49662 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.66□□□□□ -1.82
CASP4P49662 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.66□□□□□ -1.82
CASP4P49662 AL592295.2-201ENST00000612578 206 ntBASIC3.66□□□□□ -1.82
CASP4P49662 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.66□□□□□ -1.82
CASP4P49662 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.66□□□□□ -1.82
CASP4P49662 U7.8-201ENST00000619968 63 ntBASIC3.66□□□□□ -1.82
CASP4P49662 AC006065.5-201ENST00000623427 349 ntBASIC3.66□□□□□ -1.82
CASP4P49662 U6.105-201ENST00000637379 88 ntBASIC3.66□□□□□ -1.82
CASP4P49662 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CASP4P49662 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CASP4P49662 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CASP4P49662 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.65□□□□□ -1.82
CASP4P49662 CR383658.2-201ENST00000547576 1525 ntBASIC3.65□□□□□ -1.82
CASP4P49662 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CASP4P49662 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.65□□□□□ -1.83
CASP4P49662 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CASP4P49662 RNA5SP50-201ENST00000363731 107 ntBASIC3.65□□□□□ -1.83
CASP4P49662 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CASP4P49662 RNA5SP171-201ENST00000391071 115 ntBASIC3.65□□□□□ -1.83
CASP4P49662 PTMAP5-201ENST00000393073 333 ntBASIC3.65□□□□□ -1.83
CASP4P49662 RNU2-21P-201ENST00000410368 188 ntBASIC3.65□□□□□ -1.83
CASP4P49662 RNU2-37P-201ENST00000410695 177 ntBASIC3.65□□□□□ -1.83
CASP4P49662 AL158825.1-201ENST00000414735 521 ntBASIC3.65□□□□□ -1.83
CASP4P49662 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.65□□□□□ -1.83
CASP4P49662 AL389915.1-201ENST00000422463 466 ntBASIC3.65□□□□□ -1.83
CASP4P49662 FABP5P3-201ENST00000437960 408 ntBASIC3.65□□□□□ -1.83
CASP4P49662 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.65□□□□□ -1.83
CASP4P49662 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.65□□□□□ -1.83
CASP4P49662 VN1R34P-201ENST00000447387 883 ntBASIC3.65□□□□□ -1.83
CASP4P49662 RPL29P29-201ENST00000448725 423 ntBASIC3.65□□□□□ -1.83
CASP4P49662 CFTRP1-201ENST00000456646 183 ntBASIC3.65□□□□□ -1.83
CASP4P49662 AL136097.1-201ENST00000456945 913 ntBASIC3.65□□□□□ -1.83
CASP4P49662 RPL23AP67-201ENST00000465341 474 ntBASIC3.65□□□□□ -1.83
CASP4P49662 SNRPGP3-201ENST00000469405 227 ntBASIC3.65□□□□□ -1.83
CASP4P49662 RPL21P13-201ENST00000488305 481 ntBASIC3.65□□□□□ -1.83
CASP4P49662 RPL21P129-201ENST00000491732 478 ntBASIC3.65□□□□□ -1.83
CASP4P49662 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.65□□□□□ -1.83
CASP4P49662 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.65□□□□□ -1.83
CASP4P49662 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.65□□□□□ -1.83
CASP4P49662 PTGES3P3-201ENST00000511479 482 ntBASIC3.65□□□□□ -1.83
CASP4P49662 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.65□□□□□ -1.83
CASP4P49662 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.65□□□□□ -1.83
CASP4P49662 AC104229.1-201ENST00000561364 255 ntBASIC3.65□□□□□ -1.83
CASP4P49662 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.65□□□□□ -1.83
CASP4P49662 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.65□□□□□ -1.83
CASP4P49662 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.65□□□□□ -1.83
CASP4P49662 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.65□□□□□ -1.83
CASP4P49662 AC006557.5-201ENST00000603126 811 ntBASIC3.65□□□□□ -1.83
CASP4P49662 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.65□□□□□ -1.83
CASP4P49662 AL021368.1-201ENST00000607490 540 ntBASIC3.65□□□□□ -1.83
CASP4P49662 AC092354.2-201ENST00000607786 514 ntBASIC3.65□□□□□ -1.83
CASP4P49662 AC112503.1-201ENST00000608436 391 ntBASIC3.65□□□□□ -1.83
CASP4P49662 AL391261.4-201ENST00000616012 481 ntBASIC3.65□□□□□ -1.83
CASP4P49662 AC073569.3-201ENST00000619055 682 ntBASIC3.65□□□□□ -1.83
CASP4P49662 AL590396.2-201ENST00000636511 1041 ntBASIC3.65□□□□□ -1.83
CASP4P49662 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CASP4P49662 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CASP4P49662 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.65□□□□□ -1.83
CASP4P49662 SEPT7P7-201ENST00000420492 1301 ntBASIC3.65□□□□□ -1.83
CASP4P49662 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CASP4P49662 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CASP4P49662 MTCO1P12-201ENST00000414273 1543 ntBASIC3.65□□□□□ -1.83
CASP4P49662 GABPAP-201ENST00000419271 1356 ntBASIC3.64□□□□□ -1.83
CASP4P49662 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CASP4P49662 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.64□□□□□ -1.83
CASP4P49662 RNU6-1005P-201ENST00000384519 107 ntBASIC3.64□□□□□ -1.83
CASP4P49662 AL357078.2-201ENST00000416486 427 ntBASIC3.64□□□□□ -1.83
CASP4P49662 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.64□□□□□ -1.83
CASP4P49662 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.64□□□□□ -1.83
CASP4P49662 AL121882.1-201ENST00000422893 417 ntBASIC3.64□□□□□ -1.83
CASP4P49662 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.64□□□□□ -1.83
CASP4P49662 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.64□□□□□ -1.83
CASP4P49662 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.64□□□□□ -1.83
CASP4P49662 PSMA2P3-201ENST00000429685 675 ntBASIC3.64□□□□□ -1.83
CASP4P49662 MTND4P15-201ENST00000437913 1033 ntBASIC3.64□□□□□ -1.83
CASP4P49662 UBE2V1P5-201ENST00000440070 405 ntBASIC3.64□□□□□ -1.83
CASP4P49662 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.64□□□□□ -1.83
CASP4P49662 RPL6P5-201ENST00000445678 828 ntBASIC3.64□□□□□ -1.83
CASP4P49662 AC233982.1-201ENST00000451247 436 ntBASIC3.64□□□□□ -1.83
CASP4P49662 CYCSP35-201ENST00000451978 304 ntBASIC3.64□□□□□ -1.83
CASP4P49662 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.64□□□□□ -1.83
CASP4P49662 AC008280.2-201ENST00000455473 307 ntBASIC3.64□□□□□ -1.83
CASP4P49662 snoU13.7-201ENST00000459220 104 ntBASIC3.64□□□□□ -1.83
CASP4P49662 AL049830.2-201ENST00000480072 201 ntBASIC3.64□□□□□ -1.83
CASP4P49662 AC073522.1-201ENST00000483312 377 ntBASIC3.64□□□□□ -1.83
CASP4P49662 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.64□□□□□ -1.83
CASP4P49662 AC078817.1-201ENST00000492623 435 ntBASIC3.64□□□□□ -1.83
CASP4P49662 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CASP4P49662 RN7SKP277-201ENST00000516895 283 ntBASIC3.64□□□□□ -1.83
CASP4P49662 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms