Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.15□□□□□ -1.91
CX3CR1P49238 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CX3CR1P49238 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CX3CR1P49238 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.91
CX3CR1P49238 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CX3CR1P49238 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CX3CR1P49238 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CX3CR1P49238 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CX3CR1P49238 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.14□□□□□ -1.91
CX3CR1P49238 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CX3CR1P49238 RNU1-85P-201ENST00000364127 164 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.14□□□□□ -1.91
CX3CR1P49238 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CX3CR1P49238 RNU6-55P-201ENST00000411092 107 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 RNU6-954P-201ENST00000411355 107 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.14□□□□□ -1.91
CX3CR1P49238 AL158050.1-201ENST00000416077 457 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 RPL17P36-201ENST00000420302 549 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 AC245054.1-201ENST00000420944 258 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.14□□□□□ -1.91
CX3CR1P49238 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.14□□□□□ -1.91
CX3CR1P49238 AC096632.1-201ENST00000427395 310 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.14□□□□□ -1.91
CX3CR1P49238 AC074367.1-201ENST00000438685 1125 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 TXNP1-201ENST00000441872 371 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.14□□□□□ -1.91
CX3CR1P49238 HMGB3P8-201ENST00000449709 577 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 MRPS31P2-201ENST00000451581 518 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.14□□□□□ -1.91
CX3CR1P49238 RPL21P47-201ENST00000483696 477 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.14□□□□□ -1.91
CX3CR1P49238 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.14□□□□□ -1.91
CX3CR1P49238 MTCO3P44-201ENST00000510977 541 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.14□□□□□ -1.91
CX3CR1P49238 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.14□□□□□ -1.91
CX3CR1P49238 AC026402.1-201ENST00000513642 170 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.14□□□□□ -1.91
CX3CR1P49238 AC087272.1-201ENST00000523624 533 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.14□□□□□ -1.91
CX3CR1P49238 AP000926.4-201ENST00000527351 454 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 PDCL2P2-201ENST00000533651 189 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 AP000916.1-201ENST00000533869 835 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.14□□□□□ -1.91
CX3CR1P49238 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.14□□□□□ -1.91
CX3CR1P49238 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.14□□□□□ -1.91
CX3CR1P49238 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.14□□□□□ -1.91
CX3CR1P49238 AC022916.3-201ENST00000592961 742 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.14□□□□□ -1.91
CX3CR1P49238 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.14□□□□□ -1.91
CX3CR1P49238 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.14□□□□□ -1.91
CX3CR1P49238 AC067959.1-201ENST00000604334 379 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 AL590282.1-201ENST00000610379 1136 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 AL354976.1-201ENST00000613843 387 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 VN1R9P-201ENST00000614184 867 ntBASIC3.14□□□□□ -1.91
CX3CR1P49238 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.14□□□□□ -1.91
CX3CR1P49238 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CX3CR1P49238 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.14□□□□□ -1.91
CX3CR1P49238 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
CX3CR1P49238 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.14□□□□□ -1.91
CX3CR1P49238 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.14□□□□□ -1.91
CX3CR1P49238 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
CX3CR1P49238 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CX3CR1P49238 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CR1P49238 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CR1P49238 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
CX3CR1P49238 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CR1P49238 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CX3CR1P49238 RN7SKP227-201ENST00000364445 330 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CR1P49238 RNU6-1181P-201ENST00000384191 106 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 RNU6-481P-201ENST00000384194 107 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 RNU6-837P-201ENST00000391056 108 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 U3.39-201ENST00000408569 239 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CR1P49238 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.13□□□□□ -1.91
CX3CR1P49238 AL512661.1-201ENST00000434586 1253 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.13□□□□□ -1.91
CX3CR1P49238 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.13□□□□□ -1.91
CX3CR1P49238 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.13□□□□□ -1.91
CX3CR1P49238 snoU13.24-201ENST00000458998 104 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 AC092754.2-201ENST00000463506 460 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 AC084357.1-201ENST00000473404 255 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 RPS4XP22-201ENST00000480755 780 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 AC098799.1-201ENST00000504752 800 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.13□□□□□ -1.91
CX3CR1P49238 RNU2-27P-201ENST00000516185 142 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 RNU6-579P-201ENST00000516879 102 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.13□□□□□ -1.91
CX3CR1P49238 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.13□□□□□ -1.91
CX3CR1P49238 OR4A45P-201ENST00000529954 901 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 AC124293.1-201ENST00000530034 493 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.13□□□□□ -1.91
CX3CR1P49238 OR8K4P-201ENST00000534608 872 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.13□□□□□ -1.91
CX3CR1P49238 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.13□□□□□ -1.91
CX3CR1P49238 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CX3CR1P49238 MIR5047-201ENST00000579212 100 ntBASIC3.13□□□□□ -1.91
CX3CR1P49238 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.13□□□□□ -1.91
CX3CR1P49238 AC107982.3-201ENST00000584957 985 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms