Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 ELOCP23-201ENST00000452014 332 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 MTCO3P20-201ENST00000454926 688 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.22□□□□□ -1.89
CXCL12P48061 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.22□□□□□ -1.89
CXCL12P48061 RNU6-1218P-201ENST00000458990 108 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 AC087385.1-201ENST00000475062 312 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 BTF3L4P4-201ENST00000506381 449 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.22□□□□□ -1.89
CXCL12P48061 NDUFB4P9-201ENST00000511646 388 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 AC010374.2-201ENST00000512933 535 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 HAUS1P3-201ENST00000523909 662 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL12P48061 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.22□□□□□ -1.89
CXCL12P48061 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.22□□□□□ -1.89
CXCL12P48061 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.22□□□□□ -1.89
CXCL12P48061 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.22□□□□□ -1.89
CXCL12P48061 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.22□□□□□ -1.89
CXCL12P48061 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.22□□□□□ -1.89
CXCL12P48061 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.22□□□□□ -1.89
CXCL12P48061 AL133457.1-201ENST00000564251 987 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 MIR4716-201ENST00000579628 84 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 MIR2682-201ENST00000580305 110 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.22□□□□□ -1.89
CXCL12P48061 AL118556.2-201ENST00000614375 824 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 AL354696.1-201ENST00000614652 497 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 AP004607.9-201ENST00000618202 316 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 SNORD39.4-201ENST00000620099 78 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 MIR622-201ENST00000638396 96 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 AC073073.2-201ENST00000609827 2578 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 MTND4P10-201ENST00000446199 1363 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL12P48061 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.22□□□□□ -1.89
CXCL12P48061 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
CXCL12P48061 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CXCL12P48061 AL021368.2-201ENST00000606125 5352 ntBASIC3.21□□□□□ -1.89
CXCL12P48061 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
CXCL12P48061 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
CXCL12P48061 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CXCL12P48061 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.21□□□□□ -1.9
CXCL12P48061 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CXCL12P48061 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CXCL12P48061 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CXCL12P48061 OR5J1P-201ENST00000313544 939 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 AL589826.1-201ENST00000340697 249 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 RNU1-70P-201ENST00000362618 164 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 U3.15-201ENST00000365398 212 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 MIR92A2-201ENST00000385299 75 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 RNA5SP498-201ENST00000411342 120 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 AC010385.1-201ENST00000412374 256 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CXCL12P48061 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.21□□□□□ -1.9
CXCL12P48061 AL159169.1-201ENST00000421119 127 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 AC073069.1-201ENST00000428657 441 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCL12P48061 AL513175.1-201ENST00000431492 780 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 MTCO1P52-201ENST00000433928 531 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCL12P48061 BTBD7P2-201ENST00000441962 620 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.21□□□□□ -1.9
CXCL12P48061 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCL12P48061 AC010307.1-201ENST00000467206 836 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCL12P48061 AC103783.1-201ENST00000520506 373 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCL12P48061 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.21□□□□□ -1.9
CXCL12P48061 CKS1BP1-201ENST00000555221 240 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 AL157394.1-201ENST00000562983 1224 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCL12P48061 MIR4458-201ENST00000578872 75 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCL12P48061 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.21□□□□□ -1.9
CXCL12P48061 AC005242.1-201ENST00000585658 438 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 PSMA6P4-201ENST00000603247 718 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 AC090525.3-201ENST00000605601 189 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 HMGB1P50-201ENST00000605814 607 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.21□□□□□ -1.9
CXCL12P48061 AL356490.1-201ENST00000623079 479 ntBASIC3.21□□□□□ -1.9
CXCL12P48061 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CXCL12P48061 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CXCL12P48061 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CXCL12P48061 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CXCL12P48061 MAPK10-253ENST00000641010 4072 ntBASIC3.2□□□□□ -1.9
CXCL12P48061 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CXCL12P48061 FAM35DP-201ENST00000323387 2712 ntBASIC3.2□□□□□ -1.9
CXCL12P48061 SNORD115-48-201ENST00000364764 76 ntBASIC3.2□□□□□ -1.9
CXCL12P48061 RNU6-283P-201ENST00000364788 107 ntBASIC3.2□□□□□ -1.9
CXCL12P48061 RN7SKP220-201ENST00000410611 288 ntBASIC3.2□□□□□ -1.9
CXCL12P48061 AL139413.1-201ENST00000421309 217 ntBASIC3.2□□□□□ -1.9
CXCL12P48061 AL139281.1-201ENST00000422120 335 ntBASIC3.2□□□□□ -1.9
CXCL12P48061 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.2□□□□□ -1.9
CXCL12P48061 MTND4P24-201ENST00000424002 397 ntBASIC3.2□□□□□ -1.9
CXCL12P48061 PTP4A1P3-201ENST00000433661 420 ntBASIC3.2□□□□□ -1.9
CXCL12P48061 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.2□□□□□ -1.9
CXCL12P48061 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.2□□□□□ -1.9
CXCL12P48061 MTCO3P43-201ENST00000440974 771 ntBASIC3.2□□□□□ -1.9
CXCL12P48061 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.2□□□□□ -1.9
CXCL12P48061 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.2□□□□□ -1.9
CXCL12P48061 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.2□□□□□ -1.9
CXCL12P48061 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms