Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC097262.1-201ENST00000452559 548 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.88□□□□□ -1.79
APOBEC1P41238 AC026410.2-201ENST00000460281 156 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 AC010469.1-201ENST00000463864 576 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 RPL37P6-202ENST00000464216 403 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 AC072039.1-201ENST00000477611 581 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 RPL35P6-201ENST00000490024 372 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 AC104164.2-201ENST00000496953 495 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.88□□□□□ -1.79
APOBEC1P41238 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.88□□□□□ -1.79
APOBEC1P41238 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.88□□□□□ -1.79
APOBEC1P41238 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.88□□□□□ -1.79
APOBEC1P41238 AC117522.2-201ENST00000510049 657 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 PPBPP1-201ENST00000510807 373 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 AC006499.2-201ENST00000513470 337 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 RN7SKP234-201ENST00000517173 224 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 AL356057.1-201ENST00000533798 831 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 OR7K1P-201ENST00000546439 926 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.88□□□□□ -1.79
APOBEC1P41238 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.88□□□□□ -1.79
APOBEC1P41238 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.88□□□□□ -1.79
APOBEC1P41238 MTND6P33-201ENST00000571794 183 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 MIR5186-201ENST00000577504 120 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 MIR4700-201ENST00000578311 74 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.88□□□□□ -1.79
APOBEC1P41238 AC020914.6-201ENST00000594327 272 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 YWHAQP7-201ENST00000603536 658 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 AL354984.3-201ENST00000604803 325 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 AL009028.1-201ENST00000604895 802 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 FAM27D1-201ENST00000612308 341 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 AC007546.1-201ENST00000619452 559 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 MIR7641-1-201ENST00000627518 61 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
APOBEC1P41238 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.88□□□□□ -1.79
APOBEC1P41238 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
APOBEC1P41238 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.88□□□□□ -1.79
APOBEC1P41238 GDI2P1-201ENST00000429312 1336 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
APOBEC1P41238 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
APOBEC1P41238 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.88□□□□□ -1.79
APOBEC1P41238 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.88□□□□□ -1.79
APOBEC1P41238 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
APOBEC1P41238 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
APOBEC1P41238 DDX43P2-201ENST00000604753 1354 ntBASIC3.88□□□□□ -1.79
APOBEC1P41238 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
APOBEC1P41238 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
APOBEC1P41238 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
APOBEC1P41238 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.87□□□□□ -1.79
APOBEC1P41238 KPNA2P2-201ENST00000419546 1489 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
APOBEC1P41238 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
APOBEC1P41238 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
APOBEC1P41238 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
APOBEC1P41238 RNU1-32P-201ENST00000363937 159 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 RNA5SP509-201ENST00000364577 119 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 Y_RNA.560-201ENST00000384689 102 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 HMGB1P17-201ENST00000403495 628 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 MIR1302-8-201ENST00000408342 128 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 MIR1179-201ENST00000408703 91 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.87□□□□□ -1.79
APOBEC1P41238 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.87□□□□□ -1.79
APOBEC1P41238 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.87□□□□□ -1.79
APOBEC1P41238 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.87□□□□□ -1.79
APOBEC1P41238 AC093698.1-201ENST00000423843 571 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 AL732292.1-201ENST00000426692 226 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 OR51AB1P-201ENST00000429046 620 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.87□□□□□ -1.79
APOBEC1P41238 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.87□□□□□ -1.79
APOBEC1P41238 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.87□□□□□ -1.79
APOBEC1P41238 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.87□□□□□ -1.79
APOBEC1P41238 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.87□□□□□ -1.79
APOBEC1P41238 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.87□□□□□ -1.79
APOBEC1P41238 AC011276.1-201ENST00000469688 323 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 RN7SL303P-201ENST00000469773 251 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 AL136126.1-201ENST00000473603 402 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 MTND3P7-201ENST00000474435 343 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 RN7SL459P-201ENST00000481078 302 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 RPL5P23-201ENST00000496040 868 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 AC108941.1-201ENST00000502853 530 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 BNIP3P41-201ENST00000503774 571 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
APOBEC1P41238 AC005178.1-201ENST00000508392 440 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.87□□□□□ -1.79
APOBEC1P41238 IGLVIV-53-201ENST00000520107 367 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 AC009643.1-201ENST00000532030 391 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.87□□□□□ -1.79
APOBEC1P41238 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.87□□□□□ -1.79
APOBEC1P41238 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.87□□□□□ -1.79
APOBEC1P41238 AL133457.1-201ENST00000564251 987 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 LARP7P2-201ENST00000575306 125 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 PIGPP4-201ENST00000584447 307 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
APOBEC1P41238 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.87□□□□□ -1.79
APOBEC1P41238 AC068790.4-201ENST00000602474 263 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 AC115621.1-201ENST00000604653 858 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 AC024560.3-201ENST00000608482 349 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 AC093783.1-201ENST00000612976 329 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.87□□□□□ -1.79
APOBEC1P41238 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.87□□□□□ -1.79
APOBEC1P41238 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms