Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.59□□□□□ -1.67
CIITAP33076 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.59□□□□□ -1.67
CIITAP33076 XKRY-201ENST00000510392 1100 ntBASIC4.59□□□□□ -1.67
CIITAP33076 HMGB3P13-201ENST00000511263 607 ntBASIC4.59□□□□□ -1.67
CIITAP33076 RPL7L1P13-201ENST00000511702 739 ntBASIC4.59□□□□□ -1.67
CIITAP33076 FTH1P21-201ENST00000512179 511 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.59□□□□□ -1.67
CIITAP33076 Y_RNA.655-201ENST00000515919 96 ntBASIC4.59□□□□□ -1.67
CIITAP33076 RN7SKP31-201ENST00000516354 278 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.59□□□□□ -1.67
CIITAP33076 AC105185.1-201ENST00000518705 535 ntBASIC4.59□□□□□ -1.67
CIITAP33076 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.59□□□□□ -1.67
CIITAP33076 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.59□□□□□ -1.67
CIITAP33076 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.59□□□□□ -1.67
CIITAP33076 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.59□□□□□ -1.67
CIITAP33076 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.59□□□□□ -1.67
CIITAP33076 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CIITAP33076 OR5M7P-201ENST00000526140 972 ntBASIC4.59□□□□□ -1.67
CIITAP33076 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.59□□□□□ -1.67
CIITAP33076 AP001317.1-201ENST00000531194 960 ntBASIC4.59□□□□□ -1.67
CIITAP33076 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.59□□□□□ -1.67
CIITAP33076 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.59□□□□□ -1.67
CIITAP33076 AC005832.3-201ENST00000537929 631 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.59□□□□□ -1.67
CIITAP33076 OR8R1P-201ENST00000543943 764 ntBASIC4.59□□□□□ -1.67
CIITAP33076 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AC004217.3-201ENST00000551552 878 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.59□□□□□ -1.67
CIITAP33076 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.59□□□□□ -1.67
CIITAP33076 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CIITAP33076 SERPINE4P-201ENST00000554978 281 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AL161713.1-201ENST00000555538 145 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.59□□□□□ -1.67
CIITAP33076 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.59□□□□□ -1.67
CIITAP33076 MTCYBP28-201ENST00000566728 1132 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AC025627.2-201ENST00000576220 160 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.59□□□□□ -1.67
CIITAP33076 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.59□□□□□ -1.67
CIITAP33076 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.59□□□□□ -1.67
CIITAP33076 AC010738.1-201ENST00000604970 987 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AC105129.3-201ENST00000605455 485 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AL451086.1-201ENST00000605596 223 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AP004247.3-201ENST00000608682 624 ntBASIC4.59□□□□□ -1.67
CIITAP33076 MIR6864-201ENST00000617935 70 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AC092140.2-201ENST00000618027 521 ntBASIC4.59□□□□□ -1.67
CIITAP33076 AC067931.1-201ENST00000624190 671 ntBASIC4.59□□□□□ -1.67
CIITAP33076 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.59□□□□□ -1.67
CIITAP33076 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CIITAP33076 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CIITAP33076 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CIITAP33076 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.58□□□□□ -1.68
CIITAP33076 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CIITAP33076 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.58□□□□□ -1.68
CIITAP33076 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CIITAP33076 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CIITAP33076 RNA5SP388-201ENST00000362584 119 ntBASIC4.58□□□□□ -1.68
CIITAP33076 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.58□□□□□ -1.68
CIITAP33076 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CIITAP33076 Y_RNA.436-201ENST00000384097 102 ntBASIC4.58□□□□□ -1.68
CIITAP33076 RNU6-1200P-201ENST00000384162 107 ntBASIC4.58□□□□□ -1.68
CIITAP33076 GSTA8P-201ENST00000404253 637 ntBASIC4.58□□□□□ -1.68
CIITAP33076 AL021407.1-201ENST00000404531 386 ntBASIC4.58□□□□□ -1.68
CIITAP33076 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.58□□□□□ -1.68
CIITAP33076 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.58□□□□□ -1.68
CIITAP33076 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.58□□□□□ -1.68
CIITAP33076 EIF4EP1-201ENST00000422311 642 ntBASIC4.58□□□□□ -1.68
CIITAP33076 AL589823.1-201ENST00000429577 183 ntBASIC4.58□□□□□ -1.68
CIITAP33076 MTND1P20-201ENST00000430341 950 ntBASIC4.58□□□□□ -1.68
CIITAP33076 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.58□□□□□ -1.68
CIITAP33076 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.58□□□□□ -1.68
CIITAP33076 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.58□□□□□ -1.68
CIITAP33076 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.58□□□□□ -1.68
CIITAP33076 RPL7P18-201ENST00000478965 734 ntBASIC4.58□□□□□ -1.68
CIITAP33076 AC112198.1-201ENST00000505369 1220 ntBASIC4.58□□□□□ -1.68
CIITAP33076 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.58□□□□□ -1.68
CIITAP33076 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.58□□□□□ -1.68
CIITAP33076 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.58□□□□□ -1.68
CIITAP33076 AC087808.1-201ENST00000520501 361 ntBASIC4.58□□□□□ -1.68
CIITAP33076 IFITM8P-201ENST00000522529 394 ntBASIC4.58□□□□□ -1.68
CIITAP33076 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.58□□□□□ -1.68
CIITAP33076 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CIITAP33076 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.58□□□□□ -1.68
CIITAP33076 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.58□□□□□ -1.68
CIITAP33076 AC084824.1-201ENST00000550917 1005 ntBASIC4.58□□□□□ -1.68
CIITAP33076 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.58□□□□□ -1.68
CIITAP33076 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.58□□□□□ -1.68
CIITAP33076 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.58□□□□□ -1.68
CIITAP33076 AC022968.1-201ENST00000567372 442 ntBASIC4.58□□□□□ -1.68
CIITAP33076 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.58□□□□□ -1.68
CIITAP33076 BPTFP1-201ENST00000579209 492 ntBASIC4.58□□□□□ -1.68
CIITAP33076 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.58□□□□□ -1.68
CIITAP33076 AC135507.1-201ENST00000607214 561 ntBASIC4.58□□□□□ -1.68
CIITAP33076 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CIITAP33076 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.58□□□□□ -1.68
CIITAP33076 AP006248.2-201ENST00000623309 592 ntBASIC4.58□□□□□ -1.68
CIITAP33076 AC068620.4-201ENST00000636730 1182 ntBASIC4.58□□□□□ -1.68
CIITAP33076 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CIITAP33076 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CIITAP33076 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms