Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC110792.1-201ENST00000491826 472 ntBASIC3.95□□□□□ -1.78
CDH3P22223 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH3P22223 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH3P22223 AC093824.1-201ENST00000508796 343 ntBASIC3.95□□□□□ -1.78
CDH3P22223 RPL7L1P13-201ENST00000511702 739 ntBASIC3.95□□□□□ -1.78
CDH3P22223 RNA5SP135-201ENST00000517019 125 ntBASIC3.95□□□□□ -1.78
CDH3P22223 RNU4-60P-201ENST00000517239 135 ntBASIC3.95□□□□□ -1.78
CDH3P22223 SOD1P3-201ENST00000518682 454 ntBASIC3.95□□□□□ -1.78
CDH3P22223 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.95□□□□□ -1.78
CDH3P22223 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.95□□□□□ -1.78
CDH3P22223 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDH3P22223 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH3P22223 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH3P22223 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH3P22223 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH3P22223 MIR4286-201ENST00000580651 93 ntBASIC3.95□□□□□ -1.78
CDH3P22223 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH3P22223 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH3P22223 RNU6-156P-201ENST00000621869 107 ntBASIC3.95□□□□□ -1.78
CDH3P22223 AC124312.6-202ENST00000623624 418 ntBASIC3.95□□□□□ -1.78
CDH3P22223 AC008785.1-201ENST00000624475 456 ntBASIC3.95□□□□□ -1.78
CDH3P22223 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH3P22223 AC090897.3-201ENST00000636973 1157 ntBASIC3.95□□□□□ -1.78
CDH3P22223 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CDH3P22223 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH3P22223 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
CDH3P22223 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
CDH3P22223 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH3P22223 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH3P22223 OTUD4P1-201ENST00000237841 3067 ntBASIC3.94□□□□□ -1.78
CDH3P22223 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH3P22223 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH3P22223 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH3P22223 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CDH3P22223 HMGB1P5-201ENST00000255320 642 ntBASIC3.94□□□□□ -1.78
CDH3P22223 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDH3P22223 Y_RNA.126-201ENST00000363382 111 ntBASIC3.94□□□□□ -1.78
CDH3P22223 SNORD35B-201ENST00000363660 87 ntBASIC3.94□□□□□ -1.78
CDH3P22223 RNA5SP189-201ENST00000364920 115 ntBASIC3.94□□□□□ -1.78
CDH3P22223 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH3P22223 ERHP2-201ENST00000402323 299 ntBASIC3.94□□□□□ -1.78
CDH3P22223 SNORA3C-201ENST00000408792 125 ntBASIC3.94□□□□□ -1.78
CDH3P22223 RNU4-6P-201ENST00000410804 122 ntBASIC3.94□□□□□ -1.78
CDH3P22223 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH3P22223 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH3P22223 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH3P22223 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH3P22223 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH3P22223 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.94□□□□□ -1.78
CDH3P22223 AL691449.1-201ENST00000426570 421 ntBASIC3.94□□□□□ -1.78
CDH3P22223 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH3P22223 Z93242.1-201ENST00000427102 353 ntBASIC3.94□□□□□ -1.78
CDH3P22223 AC084290.1-201ENST00000434995 374 ntBASIC3.94□□□□□ -1.78
CDH3P22223 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH3P22223 RPL21P89-201ENST00000444021 467 ntBASIC3.94□□□□□ -1.78
CDH3P22223 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH3P22223 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CDH3P22223 PPIAP15-201ENST00000479662 484 ntBASIC3.94□□□□□ -1.78
CDH3P22223 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.94□□□□□ -1.78
CDH3P22223 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH3P22223 AC114322.1-201ENST00000506771 926 ntBASIC3.94□□□□□ -1.78
CDH3P22223 RNU6-885P-201ENST00000516607 104 ntBASIC3.94□□□□□ -1.78
CDH3P22223 RN7SKP96-201ENST00000516948 297 ntBASIC3.94□□□□□ -1.78
CDH3P22223 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH3P22223 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH3P22223 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH3P22223 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH3P22223 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH3P22223 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.94□□□□□ -1.78
CDH3P22223 SERPINE4P-201ENST00000554978 281 ntBASIC3.94□□□□□ -1.78
CDH3P22223 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH3P22223 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH3P22223 RPL23AP87-202ENST00000573039 466 ntBASIC3.94□□□□□ -1.78
CDH3P22223 AC025627.2-201ENST00000576220 160 ntBASIC3.94□□□□□ -1.78
CDH3P22223 MIR3912-201ENST00000577566 105 ntBASIC3.94□□□□□ -1.78
CDH3P22223 AC017100.2-201ENST00000584628 355 ntBASIC3.94□□□□□ -1.78
CDH3P22223 MIR5684-201ENST00000585074 65 ntBASIC3.94□□□□□ -1.78
CDH3P22223 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH3P22223 AC105227.2-201ENST00000615075 605 ntBASIC3.94□□□□□ -1.78
CDH3P22223 AC079395.3-201ENST00000615161 484 ntBASIC3.94□□□□□ -1.78
CDH3P22223 MIR6864-201ENST00000617935 70 ntBASIC3.94□□□□□ -1.78
CDH3P22223 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH3P22223 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH3P22223 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH3P22223 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH3P22223 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH3P22223 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH3P22223 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH3P22223 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CDH3P22223 BDP1P-201ENST00000582658 1990 ntBASIC3.93□□□□□ -1.78
CDH3P22223 USP8P1-201ENST00000494673 3183 ntBASIC3.93□□□□□ -1.78
CDH3P22223 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH3P22223 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH3P22223 RNU6-582P-201ENST00000362989 107 ntBASIC3.93□□□□□ -1.78
CDH3P22223 SNORD116.1-201ENST00000365628 92 ntBASIC3.93□□□□□ -1.78
CDH3P22223 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH3P22223 SNORD116-23-201ENST00000384645 92 ntBASIC3.93□□□□□ -1.78
CDH3P22223 SNORD65.1-201ENST00000390889 71 ntBASIC3.93□□□□□ -1.78
CDH3P22223 AL139098.1-201ENST00000407291 389 ntBASIC3.93□□□□□ -1.78
CDH3P22223 KRR1P1-201ENST00000419430 803 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms